dbCAN Logo

Cluster: Rep_426_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_426_c_0 Rep_426_c_0_796 947155 951639 + CE8
pfam Rep_426_c_0 Rep_426_c_0_797 952470 953555 - PMSR | SelR
CAZyme Rep_426_c_0 Rep_426_c_0_798 953747 956782 + GH2
pfam Rep_426_c_0 Rep_426_c_0_799 956947 957840 - Glyco_tranf_2_5
CAZyme Rep_426_c_0 Rep_426_c_0_800 957913 958875 + GT2
CAZyme Rep_426_c_0 Rep_426_c_0_801 958928 960340 - CE19
CAZyme Rep_426_c_0 Rep_426_c_0_802 960356 961327 - GH43_18
pfam Rep_426_c_0 Rep_426_c_0_803 961410 962390 - Acyl_transf_3
peptidase Rep_426_c_0 Rep_426_c_0_804 962560 963417 + M24.001
CAZyme Rep_426_c_0 Rep_426_c_0_805 963704 965599 + PL10_1
pfam Rep_426_c_0 Rep_426_c_0_806 965596 967197 + Apiosidase | DUF5060 | DUF5605
TC Rep_426_c_0 Rep_426_c_0_807 967314 968606 - 9.A.40.2.4
NULL(UNKNOWN) Rep_426_c_0 Rep_426_c_0_808 968717 968944 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_426_c_0 Rep_426_c_0_809 969099 969770 + 2.A.115.2.8
CAZyme Rep_426_c_0 Rep_426_c_0_810 969853 971007 - GH105
Gene ID: Rep_426_c_0_796
Type: CAZyme
Location: 947155 - 951639 (+)
Gene ID: Rep_426_c_0_797
Type: pfam
Location: 952470 - 953555 (-)
Gene ID: Rep_426_c_0_798
Type: CAZyme
Location: 953747 - 956782 (+)
Gene ID: Rep_426_c_0_799
Type: pfam
Location: 956947 - 957840 (-)
Gene ID: Rep_426_c_0_800
Type: CAZyme
Location: 957913 - 958875 (+)
Gene ID: Rep_426_c_0_801
Type: CAZyme
Location: 958928 - 960340 (-)
Gene ID: Rep_426_c_0_802
Type: CAZyme
Location: 960356 - 961327 (-)
Gene ID: Rep_426_c_0_803
Type: pfam
Location: 961410 - 962390 (-)
Gene ID: Rep_426_c_0_804
Type: peptidase
Location: 962560 - 963417 (+)
Gene ID: Rep_426_c_0_805
Type: CAZyme
Location: 963704 - 965599 (+)
Gene ID: Rep_426_c_0_806
Type: pfam
Location: 965596 - 967197 (+)
Gene ID: Rep_426_c_0_807
Type: TC
Location: 967314 - 968606 (-)
Gene ID: Rep_426_c_0_808
Type:
Location: 968717 - 968944 (+)
Gene ID: Rep_426_c_0_809
Type: TC
Location: 969099 - 969770 (+)
Gene ID: Rep_426_c_0_810
Type: CAZyme
Location: 969853 - 971007 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_426_c_0_796 vegetarian > vegan 2.51216 0.00160
Rep_426_c_0_797 vegetarian > vegan 2.83279 0.00160
Rep_426_c_0_798 vegetarian > vegan 1.96181 0.00160
Rep_426_c_0_799 vegetarian > vegan 2.06354 0.00160
Rep_426_c_0_800 vegetarian > vegan 3.25762 0.00160
Rep_426_c_0_802 vegetarian > vegan 1.52702 0.00160
Rep_426_c_0_806 vegetarian > vegan 1.59316 0.00160
Rep_426_c_0_808 vegetarian > vegan 1.62075 0.00160
Rep_426_c_0_809 vegetarian > vegan 2.76168 0.00160
Rep_426_c_0_810 vegetarian > vegan 1.85712 0.00160

🧭 Explore Read Mapping of CGC

← Back to Cluster List