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Cluster: Rep_419_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_419_c_19 Rep_419_c_19_30 37050 39209 - GH97
CAZyme Rep_419_c_19 Rep_419_c_19_31 39240 42323 - GH31_1
pfam Rep_419_c_19 Rep_419_c_19_32 42335 43660 - SusF_SusE
CAZyme Rep_419_c_19 Rep_419_c_19_33 43672 46239 - GH31_15
CAZyme Rep_419_c_19 Rep_419_c_19_34 46259 48028 - GH66
pfam Rep_419_c_19 Rep_419_c_19_35 48042 49481 - SusE | SusF_SusE | SusF_SusE
TC Rep_419_c_19 Rep_419_c_19_36 49500 50990 - 8.A.46.1.3
TC Rep_419_c_19 Rep_419_c_19_37 51007 53994 - 1.B.14.6.1
Gene ID: Rep_419_c_19_30
Type: CAZyme
Location: 37050 - 39209 (-)
Gene ID: Rep_419_c_19_31
Type: CAZyme
Location: 39240 - 42323 (-)
Gene ID: Rep_419_c_19_32
Type: pfam
Location: 42335 - 43660 (-)
Gene ID: Rep_419_c_19_33
Type: CAZyme
Location: 43672 - 46239 (-)
Gene ID: Rep_419_c_19_34
Type: CAZyme
Location: 46259 - 48028 (-)
Gene ID: Rep_419_c_19_35
Type: pfam
Location: 48042 - 49481 (-)
Gene ID: Rep_419_c_19_36
Type: TC
Location: 49500 - 50990 (-)
Gene ID: Rep_419_c_19_37
Type: TC
Location: 51007 - 53994 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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