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Cluster: Rep_419_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_419_c_77 Rep_419_c_77_10 12401 13819 + PL1
TC Rep_419_c_77 Rep_419_c_77_11 13926 15155 + 9.B.1.1.2
pfam Rep_419_c_77 Rep_419_c_77_12 15176 15913 + PNP_UDP_1
STP Rep_419_c_77 Rep_419_c_77_13 15915 16397 + CYTH
TC Rep_419_c_77 Rep_419_c_77_14 16628 18829 + 3.A.10.1.10
NULL(UNKNOWN) Rep_419_c_77 Rep_419_c_77_15 19055 20932 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_419_c_77 Rep_419_c_77_16 21201 22970 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_419_c_77 Rep_419_c_77_17 22967 25528 + 9.B.153.3.1
TC Rep_419_c_77 Rep_419_c_77_18 25569 26999 + 2.A.114.1.4
TC Rep_419_c_77 Rep_419_c_77_19 27006 27839 + 1.A.23.2.1
Gene ID: Rep_419_c_77_10
Type: CAZyme
Location: 12401 - 13819 (+)
Gene ID: Rep_419_c_77_11
Type: TC
Location: 13926 - 15155 (+)
Gene ID: Rep_419_c_77_12
Type: pfam
Location: 15176 - 15913 (+)
Gene ID: Rep_419_c_77_13
Type: STP
Location: 15915 - 16397 (+)
Gene ID: Rep_419_c_77_14
Type: TC
Location: 16628 - 18829 (+)
Gene ID: Rep_419_c_77_15
Type:
Location: 19055 - 20932 (+)
Gene ID: Rep_419_c_77_16
Type:
Location: 21201 - 22970 (+)
Gene ID: Rep_419_c_77_17
Type: TC
Location: 22967 - 25528 (+)
Gene ID: Rep_419_c_77_18
Type: TC
Location: 25569 - 26999 (+)
Gene ID: Rep_419_c_77_19
Type: TC
Location: 27006 - 27839 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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