Cluster: Rep_419_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_419
- CGC Family ID: CGCFAM_00184
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_419_c_66 | Rep_419_c_66_23 | 21035 | 24328 | - | GH32 |
| pfam | Rep_419_c_66 | Rep_419_c_66_24 | 24341 | 25525 | - | DUF4960 |
| sulfatase | Rep_419_c_66 | Rep_419_c_66_25 | 25539 | 27179 | - | S1_27 |
| TC | Rep_419_c_66 | Rep_419_c_66_26 | 27195 | 30230 | - | 1.B.14.6.1 |
Gene ID: Rep_419_c_66_23
Type: CAZyme
Location: 21035 - 24328 (-)
Type: CAZyme
Location: 21035 - 24328 (-)
Gene ID: Rep_419_c_66_24
Type: pfam
Location: 24341 - 25525 (-)
Type: pfam
Location: 24341 - 25525 (-)
Gene ID: Rep_419_c_66_25
Type: sulfatase
Location: 25539 - 27179 (-)
Type: sulfatase
Location: 25539 - 27179 (-)
Gene ID: Rep_419_c_66_26
Type: TC
Location: 27195 - 30230 (-)
Type: TC
Location: 27195 - 30230 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
Gallipaludibacter
Species
Gallipaludibacter merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.