Cluster: Rep_411_CGC8
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_411
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_411_c_27 | Rep_411_c_27_2 | 824 | 1477 | - | 3.A.1.122.2 |
| pfam | Rep_411_c_27 | Rep_411_c_27_3 | 1477 | 2457 | - | PFK |
| NULL(UNKNOWN) | Rep_411_c_27 | Rep_411_c_27_4 | 2549 | 2842 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_411_c_27 | Rep_411_c_27_5 | 2918 | 3673 | - | 3.D.10.1.5 |
| TC | Rep_411_c_27 | Rep_411_c_27_6 | 3754 | 5781 | - | 3.D.10.1.5 |
| TC | Rep_411_c_27 | Rep_411_c_27_7 | 5821 | 6636 | - | 3.D.10.1.2 |
| pfam | Rep_411_c_27 | Rep_411_c_27_8 | 6875 | 9340 | + | tRNA_bind | FDX-ACB | B3_4 | B5 | tRNA_synthFbeta |
| pfam | Rep_411_c_27 | Rep_411_c_27_9 | 9374 | 10108 | + | Transcrip_reg | TACO1_YebC_N |
| CAZyme | Rep_411_c_27 | Rep_411_c_27_10 | 10186 | 11610 | - | CE20 |
| pfam | Rep_411_c_27 | Rep_411_c_27_11 | 11624 | 12823 | - | GlcNAc_2-epim |
| TC | Rep_411_c_27 | Rep_411_c_27_12 | 12825 | 14267 | - | 2.A.2.3.6 |
| CAZyme | Rep_411_c_27 | Rep_411_c_27_13 | 14366 | 15532 | - | GH130_1 |
| CAZyme | Rep_411_c_27 | Rep_411_c_27_14 | 15550 | 16665 | - | GH26 |
| CAZyme | Rep_411_c_27 | Rep_411_c_27_15 | 16671 | 19112 | - | GH94 |
| CAZyme | Rep_411_c_27 | Rep_411_c_27_16 | 19215 | 20984 | - | GH26 | GH26 |
Gene ID: Rep_411_c_27_2
Type: TC
Location: 824 - 1477 (-)
Type: TC
Location: 824 - 1477 (-)
Gene ID: Rep_411_c_27_3
Type: pfam
Location: 1477 - 2457 (-)
Type: pfam
Location: 1477 - 2457 (-)
Gene ID: Rep_411_c_27_4
Type:
Location: 2549 - 2842 (-)
Type:
Location: 2549 - 2842 (-)
Gene ID: Rep_411_c_27_5
Type: TC
Location: 2918 - 3673 (-)
Type: TC
Location: 2918 - 3673 (-)
Gene ID: Rep_411_c_27_6
Type: TC
Location: 3754 - 5781 (-)
Type: TC
Location: 3754 - 5781 (-)
Gene ID: Rep_411_c_27_7
Type: TC
Location: 5821 - 6636 (-)
Type: TC
Location: 5821 - 6636 (-)
Gene ID: Rep_411_c_27_8
Type: pfam
Location: 6875 - 9340 (+)
Type: pfam
Location: 6875 - 9340 (+)
Gene ID: Rep_411_c_27_9
Type: pfam
Location: 9374 - 10108 (+)
Type: pfam
Location: 9374 - 10108 (+)
Gene ID: Rep_411_c_27_10
Type: CAZyme
Location: 10186 - 11610 (-)
Type: CAZyme
Location: 10186 - 11610 (-)
Gene ID: Rep_411_c_27_11
Type: pfam
Location: 11624 - 12823 (-)
Type: pfam
Location: 11624 - 12823 (-)
Gene ID: Rep_411_c_27_12
Type: TC
Location: 12825 - 14267 (-)
Type: TC
Location: 12825 - 14267 (-)
Gene ID: Rep_411_c_27_13
Type: CAZyme
Location: 14366 - 15532 (-)
Type: CAZyme
Location: 14366 - 15532 (-)
Gene ID: Rep_411_c_27_14
Type: CAZyme
Location: 15550 - 16665 (-)
Type: CAZyme
Location: 15550 - 16665 (-)
Gene ID: Rep_411_c_27_15
Type: CAZyme
Location: 16671 - 19112 (-)
Type: CAZyme
Location: 16671 - 19112 (-)
Gene ID: Rep_411_c_27_16
Type: CAZyme
Location: 19215 - 20984 (-)
Type: CAZyme
Location: 19215 - 20984 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Species
Duncaniella sp900549445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.