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Cluster: Rep_411_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_411_c_109 Rep_411_c_109_37 45763 46554 - GT2
TC Rep_411_c_109 Rep_411_c_109_38 46839 48278 - 1.A.11.2.7
pfam Rep_411_c_109 Rep_411_c_109_39 48319 48675 - P-II
NULL(UNKNOWN) Rep_411_c_109 Rep_411_c_109_40 48729 49418 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_411_c_109 Rep_411_c_109_41 49813 52053 + 1.B.14.8.7
NULL(UNKNOWN) Rep_411_c_109 Rep_411_c_109_42 52088 52966 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_411_c_109 Rep_411_c_109_43 53197 54993 + S1 | S1 | S1 | S1 | S1 | S1
TC Rep_411_c_109 Rep_411_c_109_44 55125 56051 + 3.A.1.132.6
Gene ID: Rep_411_c_109_37
Type: CAZyme
Location: 45763 - 46554 (-)
Gene ID: Rep_411_c_109_38
Type: TC
Location: 46839 - 48278 (-)
Gene ID: Rep_411_c_109_39
Type: pfam
Location: 48319 - 48675 (-)
Gene ID: Rep_411_c_109_40
Type:
Location: 48729 - 49418 (-)
Gene ID: Rep_411_c_109_41
Type: TC
Location: 49813 - 52053 (+)
Gene ID: Rep_411_c_109_42
Type:
Location: 52088 - 52966 (+)
Gene ID: Rep_411_c_109_43
Type: pfam
Location: 53197 - 54993 (+)
Gene ID: Rep_411_c_109_44
Type: TC
Location: 55125 - 56051 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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