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Cluster: Rep_411_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_411_c_105 Rep_411_c_105_77 57758 60508 - GH13_10
TC Rep_411_c_105 Rep_411_c_105_78 60745 61947 + 1.B.6.1.2
TF Rep_411_c_105 Rep_411_c_105_79 62029 62310 - 0044258
NULL(UNKNOWN) Rep_411_c_105 Rep_411_c_105_80 62307 62930 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_411_c_105 Rep_411_c_105_81 63126 64730 - 9.B.174.1.1
pfam Rep_411_c_105 Rep_411_c_105_82 64768 65262 - CTP_transf_like
STP Rep_411_c_105 Rep_411_c_105_83 65243 67258 - HATPase_c
TC Rep_411_c_105 Rep_411_c_105_84 67286 68047 - 2.A.115.2.8
Gene ID: Rep_411_c_105_77
Type: CAZyme
Location: 57758 - 60508 (-)
Gene ID: Rep_411_c_105_78
Type: TC
Location: 60745 - 61947 (+)
Gene ID: Rep_411_c_105_79
Type: TF
Location: 62029 - 62310 (-)
Gene ID: Rep_411_c_105_80
Type:
Location: 62307 - 62930 (-)
Gene ID: Rep_411_c_105_81
Type: TC
Location: 63126 - 64730 (-)
Gene ID: Rep_411_c_105_82
Type: pfam
Location: 64768 - 65262 (-)
Gene ID: Rep_411_c_105_83
Type: STP
Location: 65243 - 67258 (-)
Gene ID: Rep_411_c_105_84
Type: TC
Location: 67286 - 68047 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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