Cluster: Rep_411_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_411
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_411_c_9 | Rep_411_c_9_4 | 3089 | 4411 | + | 2.A.1.25.5 |
| CAZyme | Rep_411_c_9 | Rep_411_c_9_5 | 4408 | 5637 | + | GH171 |
| CAZyme | Rep_411_c_9 | Rep_411_c_9_6 | 5641 | 7563 | - | GH146 |
| CAZyme | Rep_411_c_9 | Rep_411_c_9_7 | 7772 | 9937 | - | GH97 |
| pfam | Rep_411_c_9 | Rep_411_c_9_8 | 10345 | 12075 | + | DHH | DHHA1 | RecJ_OB |
| TC | Rep_411_c_9 | Rep_411_c_9_9 | 12095 | 13999 | + | 2.A.16.2.2 |
| TC | Rep_411_c_9 | Rep_411_c_9_10 | 13974 | 15266 | - | 2.A.35.1.5 |
Gene ID: Rep_411_c_9_4
Type: TC
Location: 3089 - 4411 (+)
Type: TC
Location: 3089 - 4411 (+)
Gene ID: Rep_411_c_9_5
Type: CAZyme
Location: 4408 - 5637 (+)
Type: CAZyme
Location: 4408 - 5637 (+)
Gene ID: Rep_411_c_9_6
Type: CAZyme
Location: 5641 - 7563 (-)
Type: CAZyme
Location: 5641 - 7563 (-)
Gene ID: Rep_411_c_9_7
Type: CAZyme
Location: 7772 - 9937 (-)
Type: CAZyme
Location: 7772 - 9937 (-)
Gene ID: Rep_411_c_9_8
Type: pfam
Location: 10345 - 12075 (+)
Type: pfam
Location: 10345 - 12075 (+)
Gene ID: Rep_411_c_9_9
Type: TC
Location: 12095 - 13999 (+)
Type: TC
Location: 12095 - 13999 (+)
Gene ID: Rep_411_c_9_10
Type: TC
Location: 13974 - 15266 (-)
Type: TC
Location: 13974 - 15266 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Species
Duncaniella sp900549445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.