Cluster: Rep_410_CGC36
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 9
- Substrate: xylan
- Genome ID: Rep_410
- CGC Family ID: CGCFAM_00238
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_410_c_162 | Rep_410_c_162_15 | 20676 | 21779 | - | GH10 |
| CAZyme | Rep_410_c_162 | Rep_410_c_162_16 | 21808 | 24531 | - | CE6 | GH97 |
| CAZyme | Rep_410_c_162 | Rep_410_c_162_17 | 24567 | 26630 | - | GH5_21 |
| CAZyme | Rep_410_c_162 | Rep_410_c_162_18 | 26630 | 28003 | - | CBM6 | GH43_29 |
| CAZyme | Rep_410_c_162 | Rep_410_c_162_19 | 28000 | 29145 | - | CE1 |
| CAZyme | Rep_410_c_162 | Rep_410_c_162_20 | 29167 | 30495 | - | CBM6 | GH43_29 |
| NULL(UNKNOWN) | Rep_410_c_162 | Rep_410_c_162_21 | 30621 | 31286 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_410_c_162 | Rep_410_c_162_22 | 31373 | 33592 | - | GH10 |
| pfam | Rep_410_c_162 | Rep_410_c_162_23 | 33605 | 34651 | - | BT_3987-like_N | DUF5627 |
| pfam | Rep_410_c_162 | Rep_410_c_162_24 | 34685 | 36460 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_410_c_162 | Rep_410_c_162_25 | 36497 | 39337 | - | 1.B.14.6.1 |
| pfam | Rep_410_c_162 | Rep_410_c_162_26 | 39375 | 41309 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_410_c_162 | Rep_410_c_162_27 | 41325 | 44480 | - | 1.B.14.6.1 |
| CAZyme | Rep_410_c_162 | Rep_410_c_162_28 | 44546 | 46267 | - | CBM91 | GH43_12 |
| CAZyme | Rep_410_c_162 | Rep_410_c_162_29 | 46556 | 48136 | - | CBM91 | GH43_10 |
Gene ID: Rep_410_c_162_15
Type: CAZyme
Location: 20676 - 21779 (-)
Type: CAZyme
Location: 20676 - 21779 (-)
Gene ID: Rep_410_c_162_16
Type: CAZyme
Location: 21808 - 24531 (-)
Type: CAZyme
Location: 21808 - 24531 (-)
Gene ID: Rep_410_c_162_17
Type: CAZyme
Location: 24567 - 26630 (-)
Type: CAZyme
Location: 24567 - 26630 (-)
Gene ID: Rep_410_c_162_18
Type: CAZyme
Location: 26630 - 28003 (-)
Type: CAZyme
Location: 26630 - 28003 (-)
Gene ID: Rep_410_c_162_19
Type: CAZyme
Location: 28000 - 29145 (-)
Type: CAZyme
Location: 28000 - 29145 (-)
Gene ID: Rep_410_c_162_20
Type: CAZyme
Location: 29167 - 30495 (-)
Type: CAZyme
Location: 29167 - 30495 (-)
Gene ID: Rep_410_c_162_21
Type:
Location: 30621 - 31286 (-)
Type:
Location: 30621 - 31286 (-)
Gene ID: Rep_410_c_162_22
Type: CAZyme
Location: 31373 - 33592 (-)
Type: CAZyme
Location: 31373 - 33592 (-)
Gene ID: Rep_410_c_162_23
Type: pfam
Location: 33605 - 34651 (-)
Type: pfam
Location: 33605 - 34651 (-)
Gene ID: Rep_410_c_162_24
Type: pfam
Location: 34685 - 36460 (-)
Type: pfam
Location: 34685 - 36460 (-)
Gene ID: Rep_410_c_162_25
Type: TC
Location: 36497 - 39337 (-)
Type: TC
Location: 36497 - 39337 (-)
Gene ID: Rep_410_c_162_26
Type: pfam
Location: 39375 - 41309 (-)
Type: pfam
Location: 39375 - 41309 (-)
Gene ID: Rep_410_c_162_27
Type: TC
Location: 41325 - 44480 (-)
Type: TC
Location: 41325 - 44480 (-)
Gene ID: Rep_410_c_162_28
Type: CAZyme
Location: 44546 - 46267 (-)
Type: CAZyme
Location: 44546 - 46267 (-)
Gene ID: Rep_410_c_162_29
Type: CAZyme
Location: 46556 - 48136 (-)
Type: CAZyme
Location: 46556 - 48136 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.