PROTEIN: Rep_410_c_162_21
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Protein File & Metadata
Source:
Rep_410_c_162_21.pdb
Genome ID:
Protein ID:
Rep_410_c_162_21
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Protein Sequence
MKKLLLSIFS VAAAMTAAAA LPETGTVVAS YYDGNGGTMI GWGADAVDGN AVEDGKPCIS 60 LTNNAAKANF WDAQTAIDDV NLDANVTYYI SFDVKGTAAA TGIGAGIQDK DTYAGKGDFS 120 TFDVTTEWKH CIISGECTGT PANRITFNWG HYAGICYMTN VKLYTADESG IADTVIDTPV 180 TRWVVYNLQG IKVMDVDNEA ALSTLDRGIY IVNGKKAVLG K 221
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C7J5E2-F1-model_v4 | 25 | 171 | 70 | 241 | 0.515 |
0.8117 |
| AF-A0A0P0W8T4-F1-model_v4 | 25 | 171 | 115 | 279 | 0.4395 |
0.8203 |
| AF-I1LIX9-F1-model_v4 | 21 | 180 | 53 | 513 | 0.3791 |
0.7325 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7M2X480 | CBM4 | 24 | 167 | 27 | 170 | 0.6163 |
0.8325 |
| AF-Q6V8M0-F1-model_v4 | CBM4 | 26 | 165 | 1 | 165 | 0.5963 |
0.8151 |
| A0A7C9G5D6 | CBM4 | 26 | 168 | 24 | 169 | 0.5814 |
0.789 |
| AF-A0A1D8AV93-F1-model_v4 | CBM4 | 24 | 166 | 50 | 201 | 0.569 |
0.837 |
| AF-D9SVH1-F1-model_v4 | CBM4 | 25 | 167 | 58 | 205 | 0.565 |
0.8397 |
| QQQ18413.1 | CBM85 | 24 | 170 | 37 | 192 | 0.5609 |
0.8028 |
| AF-D9SS65-F1-model_v4 | CBM4 | 24 | 172 | 37 | 201 | 0.5458 |
0.7719 |
| AF-Q9LAJ1-F1-model_v4 | CBM4 | 24 | 172 | 37 | 201 | 0.5457 |
0.7725 |
| UXX92248.1 | CBM4 | 24 | 167 | 55 | 197 | 0.5285 |
0.8337 |
| AF-A0A286IJ08-F1-model_v4 | CBM4 , GH5_25 | 2 | 218 | 80 | 580 | 0.4967 |
0.7407 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7M2X480 | CBM4 | 24 | 167 | 27 | 170 | 0.6163 |
0.8325 |
| A0A9Q8ZY98 | CBM85 | 23 | 170 | 24 | 181 | 0.6119 |
0.8315 |
| A0A430EBL9 | CBM85 | 24 | 170 | 25 | 180 | 0.5915 |
0.8069 |
| A0A518RD10 | CBM85 | 24 | 168 | 32 | 182 | 0.5911 |
0.8203 |
| UYY76398.1 | CBM85 | 24 | 168 | 31 | 186 | 0.5885 |
0.8249 |
| A0A1P8PSX2 | CBM85 | 23 | 170 | 29 | 184 | 0.5825 |
0.8123 |
| A0A7C9G5D6 | CBM4 | 26 | 168 | 24 | 169 | 0.5814 |
0.789 |
| QNP43049.1 | CBM85 | 24 | 170 | 27 | 181 | 0.5724 |
0.7823 |
| B5YCN1 | CBM4 | 24 | 166 | 47 | 196 | 0.5709 |
0.8303 |
| A0A1D8AV93 | CBM4 | 24 | 166 | 50 | 201 | 0.569 |
0.837 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4mgs-assembly1.cif.gz_A | 25 | 166 | 1 | 141 | 0.6604 |
0.8282 |
| 1cx1-assembly1.cif.gz_A | 22 | 169 | 1 | 153 | 0.6175 |
0.7773 |
| 2y6l-assembly1.cif.gz_A | 25 | 166 | 1 | 167 | 0.6026 |
0.818 |
| 5dpn-assembly1.cif.gz_A | 26 | 166 | 1 | 166 | 0.5976 |
0.8141 |
| 3jxs-assembly3.cif.gz_C | 25 | 165 | 1 | 166 | 0.589 |
0.8028 |
| 3p6b-assembly1.cif.gz_B-2 | 23 | 168 | 10 | 176 | 0.5688 |
0.7928 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8NK90-F1-model_v4 | 25 | 219 | 59 | 557 | 0.4177 |
0.6999 |
| AF-Q05156-F1-model_v4 | 25 | 169 | 30 | 174 | 0.3537 |
0.8074 |
| AF-A3DCH1-F1-model_v4 | 23 | 168 | 35 | 201 | 0.3417 |
0.8005 |
| AF-P0C2S1-F1-model_v4 | 23 | 168 | 35 | 200 | 0.3409 |
0.7997 |