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Cluster: Rep_406_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_406_c_6 Rep_406_c_6_24 23026 25473 + 8.A.3.3.4
NULL(UNKNOWN) Rep_406_c_6 Rep_406_c_6_25 25506 27038 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_406_c_6 Rep_406_c_6_26 27035 28198 + GT4
pfam Rep_406_c_6 Rep_406_c_6_27 28203 29312 + PS_pyruv_trans
CAZyme Rep_406_c_6 Rep_406_c_6_28 29409 30554 + GT4
CAZyme Rep_406_c_6 Rep_406_c_6_29 30566 31762 + GT4
CAZyme Rep_406_c_6 Rep_406_c_6_30 31759 32487 + GT32
pfam Rep_406_c_6 Rep_406_c_6_31 32581 33609 + EpsG
CAZyme Rep_406_c_6 Rep_406_c_6_32 33619 34515 + GT2
NULL(UNKNOWN) Rep_406_c_6 Rep_406_c_6_33 34509 35483 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_406_c_6 Rep_406_c_6_34 35483 36523 + GT2
CAZyme Rep_406_c_6 Rep_406_c_6_35 36548 37615 + GT2
CAZyme Rep_406_c_6 Rep_406_c_6_36 37624 38694 + GT4
NULL(UNKNOWN) Rep_406_c_6 Rep_406_c_6_37 38697 39617 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_406_c_6 Rep_406_c_6_38 39652 40785 + GT4
pfam Rep_406_c_6 Rep_406_c_6_39 40766 41371 + Acetyltransf_1
TC Rep_406_c_6 Rep_406_c_6_40 41533 42114 + 9.B.18.1.3
pfam Rep_406_c_6 Rep_406_c_6_41 42156 43316 + DegT_DnrJ_EryC1
TC Rep_406_c_6 Rep_406_c_6_42 43301 44944 + 9.B.18.2.1
Gene ID: Rep_406_c_6_24
Type: TC
Location: 23026 - 25473 (+)
Gene ID: Rep_406_c_6_25
Type:
Location: 25506 - 27038 (+)
Gene ID: Rep_406_c_6_26
Type: CAZyme
Location: 27035 - 28198 (+)
Gene ID: Rep_406_c_6_27
Type: pfam
Location: 28203 - 29312 (+)
Gene ID: Rep_406_c_6_28
Type: CAZyme
Location: 29409 - 30554 (+)
Gene ID: Rep_406_c_6_29
Type: CAZyme
Location: 30566 - 31762 (+)
Gene ID: Rep_406_c_6_30
Type: CAZyme
Location: 31759 - 32487 (+)
Gene ID: Rep_406_c_6_31
Type: pfam
Location: 32581 - 33609 (+)
Gene ID: Rep_406_c_6_32
Type: CAZyme
Location: 33619 - 34515 (+)
Gene ID: Rep_406_c_6_33
Type:
Location: 34509 - 35483 (+)
Gene ID: Rep_406_c_6_34
Type: CAZyme
Location: 35483 - 36523 (+)
Gene ID: Rep_406_c_6_35
Type: CAZyme
Location: 36548 - 37615 (+)
Gene ID: Rep_406_c_6_36
Type: CAZyme
Location: 37624 - 38694 (+)
Gene ID: Rep_406_c_6_37
Type:
Location: 38697 - 39617 (+)
Gene ID: Rep_406_c_6_38
Type: CAZyme
Location: 39652 - 40785 (+)
Gene ID: Rep_406_c_6_39
Type: pfam
Location: 40766 - 41371 (+)
Gene ID: Rep_406_c_6_40
Type: TC
Location: 41533 - 42114 (+)
Gene ID: Rep_406_c_6_41
Type: pfam
Location: 42156 - 43316 (+)
Gene ID: Rep_406_c_6_42
Type: TC
Location: 43301 - 44944 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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