PROTEIN: Rep_406_c_6_25
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Protein File & Metadata
Source:
Rep_406_c_6_25.pdb
Genome ID:
Protein ID:
Rep_406_c_6_25
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Protein Sequence
MAGNLRIAKN AVYLYARTIV SMIVGIFSVR VMLEALGVED YGLLNVAGGV LGMFAFLIES 60 LGTSTSRYIT FELGRGDLKR INDTFCTSMF IFVGIAVLMV ILGETVGLWM LRTKLVIPEG 120 RETAAEWVFH LSVLGAAIGI PQAPYNACMT AHEKFNISAY LSLYSSFGRL GILYLVSVSS 180 FDHLIYYVIL NFALGLTTLI YSRWYCISHF PEAKFHWKFD KELLKPMLKF SFWEIFGSIS 240 RILKGTGFNM VINMFFGVAI NAAIGIGNTV AGAVTGLAFT VTSAFKPGMV KQYARNDFGQ 300 FKESLVNASL ISMILYGVFG VPLLVELNYV MSIWLTEIPE YSREICVIQL LSNTILMVTL 360 VTAESLKSMG HNMGINLVQC LHGFVTLSLV LLVLYLGYSP VVACFVFNLG ALWYFIGSCY 420 LVGKRTGWKY IIRLIYNTVF KVLIVEAIVY IILLNIHRIM GESFATLITN CVLSVILFII 480 LSSRFLIPKE QQAQLIAYIK SQYRAAQATS 510
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 1 | 504 | 1 | 476 | 0.8597 |
0.9032 |
| AF-H9L497-F1-model_v4 | 1 | 504 | 1 | 485 | 0.8576 |
0.9001 |
| AF-Q58467-F1-model_v4 | 1 | 502 | 1 | 507 | 0.856 |
0.8853 |
| AF-A0A0H3GSJ3-F1-model_v4 | 2 | 504 | 1 | 478 | 0.854 |
0.8973 |
| AF-P77377-F1-model_v4 | 1 | 504 | 1 | 485 | 0.8467 |
0.8908 |
| AF-Q8DPI1-F1-model_v4 | 2 | 510 | 1 | 495 | 0.8448 |
0.8749 |
| AF-Q2FXH6-F1-model_v4 | 1 | 503 | 1 | 549 | 0.8259 |
0.8856 |
| AF-Q32ET1-F1-model_v4 | 3 | 498 | 1 | 511 | 0.8246 |
0.8666 |
| AF-Q2G0R7-F1-model_v4 | 2 | 503 | 1 | 503 | 0.8229 |
0.8525 |
| AF-P37169-F1-model_v4 | 1 | 498 | 10 | 524 | 0.8224 |
0.8707 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 505 | 1 | 511 | 0.8562 |
0.8856 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 502 | 37 | 545 | 0.8021 |
0.8586 |
| QNU38870.1 | GT4 | 3 | 509 | 1 | 515 | 0.7611 |
0.8426 |
| QJC17489.1 | GT2 | 1 | 510 | 339 | 849 | 0.7351 |
0.923 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 2 | 508 | 1 | 591 | 0.6878 |
0.889 |
| AF-D1BIF1-F1-model_v4 | GT4 | 2 | 510 | 7 | 659 | 0.686 |
0.9029 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 510 | 6 | 758 | 0.6709 |
0.8537 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 510 | 1 | 550 | 0.6706 |
0.8441 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 7 | 510 | 1 | 583 | 0.6695 |
0.8471 |
| AF-D7BDH0-F1-model_v4 | GT4 | 2 | 500 | 1 | 523 | 0.6625 |
0.867 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 505 | 1 | 511 | 0.8562 |
0.8856 |
| A0A160T2N7 | GT28 | 1 | 502 | 37 | 545 | 0.8021 |
0.8586 |
| QNU38870.1 | GT4 | 3 | 509 | 1 | 515 | 0.7611 |
0.8426 |
| QJC17489.1 | GT2 | 1 | 510 | 339 | 849 | 0.7351 |
0.923 |
| A0A3Q9G719 | GT4 | 2 | 508 | 1 | 591 | 0.6878 |
0.889 |
| D1BIF1 | GT4 | 2 | 510 | 7 | 659 | 0.686 |
0.9029 |
| A0A517Z2I8 | GT2 | 1 | 510 | 6 | 758 | 0.6709 |
0.8537 |
| A0A3T0RPT8 | GT4 | 1 | 510 | 1 | 550 | 0.6706 |
0.8441 |
| A0A2U8PPB3 | GT4 | 7 | 510 | 1 | 583 | 0.6695 |
0.8471 |
| D7BDH0 | GT4 | 2 | 500 | 1 | 523 | 0.6625 |
0.867 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 13 | 495 | 1 | 496 | 0.8271 |
0.8774 |
| 7wag-assembly1.cif.gz_A | 4 | 498 | 1 | 512 | 0.8119 |
0.863 |
| 6nc6-assembly2.cif.gz_B | 9 | 493 | 1 | 461 | 0.8102 |
0.8673 |
| 6cc4-assembly1.cif.gz_A | 1 | 499 | 40 | 608 | 0.7676 |
0.8653 |
| 6fhz-assembly1.cif.gz_A | 8 | 430 | 8 | 436 | 0.7663 |
0.8687 |
| 4mlb-assembly1.cif.gz_C | 1 | 427 | 4 | 447 | 0.6843 |
0.7844 |
| 6hfb-assembly3.cif.gz_C | 1 | 427 | 4 | 446 | 0.6831 |
0.7823 |
| 6gwh-assembly1.cif.gz_A | 2 | 427 | 4 | 434 | 0.6784 |
0.7702 |
| 3wbn-assembly1.cif.gz_A | 2 | 427 | 3 | 445 | 0.6774 |
0.7774 |
| 6ids-assembly1.cif.gz_A | 1 | 427 | 2 | 428 | 0.6712 |
0.7585 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 5 | 510 | 1 | 505 | 0.9133 |
0.9307 |
| AF-Q48457-F1-model_v4 | 1 | 506 | 1 | 485 | 0.8593 |
0.8974 |
| AF-Q58467-F1-model_v4 | 1 | 502 | 1 | 507 | 0.856 |
0.8853 |
| AF-P33699-F1-model_v4 | 1 | 509 | 4 | 490 | 0.8493 |
0.8911 |
| AF-P77377-F1-model_v4 | 1 | 504 | 1 | 485 | 0.8467 |
0.8908 |
| AF-O34674-F1-model_v4 | 1 | 503 | 1 | 539 | 0.835 |
0.8877 |
| AF-D4GU68-F1-model_v4 | 3 | 505 | 1 | 472 | 0.828 |
0.8767 |
| AF-O67658-F1-model_v4 | 3 | 510 | 1 | 499 | 0.8263 |
0.8554 |
| AF-O34238-F1-model_v4 | 1 | 498 | 4 | 525 | 0.8255 |
0.8741 |
| AF-O32273-F1-model_v4 | 1 | 507 | 2 | 483 | 0.8239 |
0.8668 |