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Cluster: Rep_401_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_401_c_0 Rep_401_c_0_65 84520 86547 + GH36
CAZyme Rep_401_c_0 Rep_401_c_0_66 86617 89082 + GH36
TF Rep_401_c_0 Rep_401_c_0_67 89136 93155 + HTH_AraC
CAZyme Rep_401_c_0 Rep_401_c_0_68 93265 95529 + GH3
CAZyme Rep_401_c_0 Rep_401_c_0_69 95531 97456 + CE20 | CE20
CAZyme Rep_401_c_0 Rep_401_c_0_70 97475 99613 + GH36
NULL(UNKNOWN) Rep_401_c_0 Rep_401_c_0_71 99703 101685 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_401_c_0 Rep_401_c_0_72 101657 103438 + GH110
CAZyme Rep_401_c_0 Rep_401_c_0_73 103467 105671 + GH92
TC Rep_401_c_0 Rep_401_c_0_74 105986 107365 + 2.A.22.5.3
Gene ID: Rep_401_c_0_65
Type: CAZyme
Location: 84520 - 86547 (+)
Gene ID: Rep_401_c_0_66
Type: CAZyme
Location: 86617 - 89082 (+)
Gene ID: Rep_401_c_0_67
Type: TF
Location: 89136 - 93155 (+)
Gene ID: Rep_401_c_0_68
Type: CAZyme
Location: 93265 - 95529 (+)
Gene ID: Rep_401_c_0_69
Type: CAZyme
Location: 95531 - 97456 (+)
Gene ID: Rep_401_c_0_70
Type: CAZyme
Location: 97475 - 99613 (+)
Gene ID: Rep_401_c_0_71
Type:
Location: 99703 - 101685 (+)
Gene ID: Rep_401_c_0_72
Type: CAZyme
Location: 101657 - 103438 (+)
Gene ID: Rep_401_c_0_73
Type: CAZyme
Location: 103467 - 105671 (+)
Gene ID: Rep_401_c_0_74
Type: TC
Location: 105986 - 107365 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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