PROTEIN: Rep_401_c_0_71
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Protein File & Metadata
Source:
Rep_401_c_0_71.pdb
Genome ID:
Protein ID:
Rep_401_c_0_71
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Protein Sequence
MRLKALFAVS VLFASANGTE TYWKLHPASM AIEYSPAEAG PHSDHLEMSG KRISAVVRYG 60 ARADGSLALD KSLVWPGFRT IPNDTHGSLM RHVAFDVIDE LVIERQPAAP KVEGVSFDGL 120 LAITQSTPKD VKIERTLFPS VEHPVFVERV KLTNVGREAV DIEIPALDMS VATPDARGVD 180 GSYRILTTVE GARTLRLKPG SEAEFAVVSQ ALREGDKPLT PDVAAEEAAR RALVGELTGS 240 LVLDTPDEVL DRMFAMSKIR ACESIYETKG GPLHGPGGET YYAAIWANDE AEYANPFFAF 300 TGYAYADSSA MNSFRHFARF MNPDYKPIPS SIVAEGADIW NGAGDRGDAA MIAYGASRYA 360 LASGSKEVAS ELWPLIEWCL EYCRRNLNSE GVVRSDHDEL ESRFPAGEAN LCTSSLYYDA 420 LLSAAMLARD LKMPSKMSAS YRRQAAELAK AIDCYFAGPV EEIDTYAYYK GNDRLRSWIC 480 IPLTVGINDK LEPTLDALFS PELWTENGLL TQSGTSTFWD RSTLYALRGV LQAGAVERAM 540 PYLTAYSTKR LTGDHVPYAI EAWPEGNQRH LSAESALYAR IFTEGMFGIR PTGLKRFEMT 600 PRLPKEWPSM ALRNIKAFGE DFDIEVSRLE DGRLDVRVMS AGKPLARKTI KDGGKIDVKF 660
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8BP56-F1-model_v4 | 24 | 660 | 2 | 688 | 0.725 |
0.7834 |
| AF-A0A175W6Z5-F1-model_v4 | 20 | 653 | 5 | 792 | 0.7247 |
0.8308 |
| AF-D3ZY02-F1-model_v4 | 24 | 660 | 3 | 688 | 0.724 |
0.7852 |
| AF-U7PID1-F1-model_v4 | 21 | 652 | 7 | 818 | 0.7213 |
0.8404 |
| AF-Q9VKD9-F1-model_v4 | 25 | 660 | 20 | 737 | 0.7198 |
0.801 |
| AF-Q54KX5-F1-model_v4 | 23 | 660 | 16 | 710 | 0.7158 |
0.7828 |
| AF-A0A133CSL2-F1-model_v4 | 26 | 660 | 9 | 686 | 0.7106 |
0.7736 |
| AF-Q32M88-F1-model_v4 | 24 | 660 | 2 | 689 | 0.7079 |
0.7865 |
| AF-Q59005-F1-model_v4 | 41 | 598 | 1 | 615 | 0.6984 |
0.8045 |
| AF-A0JMP0-F1-model_v4 | 52 | 660 | 1 | 646 | 0.6903 |
0.7592 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B2Z0H3-F1-model_v4 | CBM0 | 15 | 660 | 24 | 875 | 0.8403 |
0.9819 |
| AF-D1CGZ9-F1-model_v4 | GH0 | 20 | 651 | 1 | 710 | 0.7562 |
0.8753 |
| AF-A0A089KG41-F1-model_v4 | GH94 | 18 | 654 | 3 | 771 | 0.7488 |
0.844 |
| AF-A0A089LI24-F1-model_v4 | GH94 | 19 | 660 | 1 | 756 | 0.7482 |
0.8358 |
| AF-A0A0K2SMW4-F1-model_v4 | GH0 | 19 | 633 | 1 | 654 | 0.7464 |
0.8151 |
| AF-A0A1B0VIS7-F1-model_v4 | GH94 | 18 | 651 | 4 | 788 | 0.7401 |
0.8459 |
| AF-C7NNE0-F1-model_v4 | GH94 | 20 | 651 | 1 | 785 | 0.7399 |
0.8466 |
| AF-A0A089MHT9-F1-model_v4 | GH94 | 1 | 660 | 5 | 811 | 0.7391 |
0.8299 |
| AF-H9UBN9-F1-model_v4 | GH94 | 18 | 651 | 4 | 788 | 0.7391 |
0.8448 |
| AF-I2F841-F1-model_v4 | GH94 | 18 | 654 | 4 | 792 | 0.7363 |
0.8405 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WFB35204.1 | GH94 | 18 | 660 | 1 | 752 | 0.7608 |
0.8412 |
| A0A1Q2MCY1 | GH94 | 18 | 660 | 2 | 748 | 0.7498 |
0.8332 |
| A0A089KG41 | GH94 | 18 | 654 | 3 | 771 | 0.7488 |
0.844 |
| A0A089LI24 | GH94 | 19 | 660 | 1 | 756 | 0.7482 |
0.8358 |
| QYY36758.1 | GH94 | 17 | 653 | 1 | 757 | 0.7468 |
0.8351 |
| WFB34355.1 | GH94 | 22 | 653 | 6 | 775 | 0.7437 |
0.8462 |
| A0A482D4L9 | GH94 | 18 | 652 | 3 | 788 | 0.743 |
0.8479 |
| C7NNE0 | GH94 | 20 | 651 | 1 | 785 | 0.7399 |
0.8466 |
| WFB37418.1 | GH94 | 17 | 652 | 10 | 767 | 0.7396 |
0.8332 |
| C9RC19 | GH15 | 18 | 657 | 1 | 608 | 0.7395 |
0.7819 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1v7v-assembly1.cif.gz_A | 20 | 651 | 1 | 779 | 0.7394 |
0.8437 |
| 8bou-assembly1.cif.gz_A | 17 | 660 | 1 | 794 | 0.7313 |
0.8323 |
| 8ho8-assembly1.cif.gz_B | 21 | 660 | 1 | 796 | 0.724 |
0.8299 |
| 8ho9-assembly1.cif.gz_A | 20 | 651 | 1 | 811 | 0.7237 |
0.8403 |
| 4zlf-assembly1.cif.gz_A | 22 | 651 | 1 | 785 | 0.723 |
0.8306 |
| 3qde-assembly1.cif.gz_B | 20 | 651 | 1 | 811 | 0.7225 |
0.839 |
| 3s4b-assembly1.cif.gz_A | 20 | 660 | 1 | 810 | 0.7222 |
0.832 |
| 3afj-assembly1.cif.gz_B | 20 | 660 | 1 | 810 | 0.7206 |
0.8302 |
| 3acs-assembly1.cif.gz_B | 20 | 660 | 1 | 810 | 0.7203 |
0.83 |
| 3act-assembly1.cif.gz_A | 20 | 660 | 1 | 810 | 0.7196 |
0.8292 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q76IQ9-F1-model_v4 | 20 | 651 | 1 | 801 | 0.7342 |
0.8475 |
| AF-Q9F8X1-F1-model_v4 | 20 | 651 | 1 | 800 | 0.7339 |
0.8469 |
| AF-Q8P3J4-F1-model_v4 | 17 | 652 | 9 | 798 | 0.7255 |
0.8319 |
| AF-B9K7M6-F1-model_v4 | 20 | 651 | 1 | 813 | 0.7252 |
0.8426 |
| AF-Q8BP56-F1-model_v4 | 24 | 660 | 2 | 688 | 0.725 |
0.7834 |
| AF-Q7S0S2-F1-model_v4 | 21 | 652 | 7 | 791 | 0.7238 |
0.8317 |
| AF-F1NZI4-F1-model_v4 | 25 | 660 | 15 | 697 | 0.7191 |
0.7838 |
| AF-Q54KX5-F1-model_v4 | 23 | 660 | 16 | 710 | 0.7158 |
0.7828 |
| AF-Q32M88-F1-model_v4 | 24 | 660 | 2 | 689 | 0.7079 |
0.7865 |
| AF-Q4J9D4-F1-model_v4 | 43 | 603 | 1 | 576 | 0.7029 |
0.7793 |