Cluster: Rep_3562_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3562
- CGC Family ID: CGCFAM_03561
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3562_c_2 | Rep_3562_c_2_230 | 231306 | 233609 | + | GH3 |
| pfam | Rep_3562_c_2 | Rep_3562_c_2_231 | 233637 | 233885 | - | SpoIIID |
| pfam | Rep_3562_c_2 | Rep_3562_c_2_232 | 233984 | 235120 | - | NTP_transf_5 |
| TC | Rep_3562_c_2 | Rep_3562_c_2_233 | 235121 | 236653 | - | 2.A.66.1.40 |
| NULL(UNKNOWN) | Rep_3562_c_2 | Rep_3562_c_2_234 | 236657 | 237511 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3562_c_2 | Rep_3562_c_2_235 | 237508 | 238740 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| CAZyme | Rep_3562_c_2 | Rep_3562_c_2_236 | 238742 | 239764 | - | GT2 |
Gene ID: Rep_3562_c_2_230
Type: CAZyme
Location: 231306 - 233609 (+)
Type: CAZyme
Location: 231306 - 233609 (+)
Gene ID: Rep_3562_c_2_231
Type: pfam
Location: 233637 - 233885 (-)
Type: pfam
Location: 233637 - 233885 (-)
Gene ID: Rep_3562_c_2_232
Type: pfam
Location: 233984 - 235120 (-)
Type: pfam
Location: 233984 - 235120 (-)
Gene ID: Rep_3562_c_2_233
Type: TC
Location: 235121 - 236653 (-)
Type: TC
Location: 235121 - 236653 (-)
Gene ID: Rep_3562_c_2_234
Type:
Location: 236657 - 237511 (-)
Type:
Location: 236657 - 237511 (-)
Gene ID: Rep_3562_c_2_235
Type: pfam
Location: 237508 - 238740 (-)
Type: pfam
Location: 237508 - 238740 (-)
Gene ID: Rep_3562_c_2_236
Type: CAZyme
Location: 238742 - 239764 (-)
Type: CAZyme
Location: 238742 - 239764 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp902490735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.