PROTEIN: Rep_3562_c_2_234
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Protein File & Metadata
Source:
Rep_3562_c_2_234.pdb
Genome ID:
Protein ID:
Rep_3562_c_2_234
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Protein Sequence
MKEQVTILVQ SCDAYADIWP VFFEMLYKKW PDCPYGIVLN TETKSFKFNG LNIKSFALYK 60 GLPEEKVKEI SWSQRCIETL KLIDTKYVLV FLEDFFLKDT VNQEEFDALI KKADSIKNFA 120 CVYFNFNNTP VFYNKKLGLN FIHNDTWARV NSTCGLWNRE EFLKTLVPGE SPWEYEQTAT 180 ARYKKKNQRF YCTKYDTGPL KMDFHVQIMQ GKWTEECVEF LTQEGIKFDF NKRGTVPFPK 240 PPKTKMRESV KNNIILFSQK NLFIYNVTNC IRSVFRGVKK AFKR 284
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WMX3-F1-model_v4 | 1 | 281 | 1 | 301 | 0.5608 |
0.6118 |
| AF-A0A175WBK3-F1-model_v4 | 1 | 235 | 13 | 360 | 0.5306 |
0.728 |
| AF-Q9RQP9-F1-model_v4 | 1 | 284 | 45 | 404 | 0.5245 |
0.6343 |
| AF-Q8ZQU9-F1-model_v4 | 1 | 275 | 1 | 238 | 0.5214 |
0.6288 |
| AF-A0A044SYE9-F1-model_v4 | 1 | 268 | 46 | 397 | 0.5199 |
0.6511 |
| AF-Q8DPD9-F1-model_v4 | 1 | 276 | 2 | 274 | 0.5141 |
0.59 |
| AF-Q329N9-F1-model_v4 | 1 | 276 | 2 | 290 | 0.512 |
0.5867 |
| AF-K0F021-F1-model_v4 | 1 | 275 | 55 | 429 | 0.5075 |
0.6466 |
| AF-Q8ZL53-F1-model_v4 | 1 | 277 | 3 | 293 | 0.5068 |
0.5868 |
| AF-A0A044S5F1-F1-model_v4 | 1 | 263 | 73 | 383 | 0.5032 |
0.6507 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A3CYN8-F1-model_v4 | GT0 | 1 | 241 | 2 | 249 | 0.6348 |
0.7173 |
| AF-A0A0K2JDI1-F1-model_v4 | GT2 | 1 | 239 | 1 | 243 | 0.6329 |
0.7134 |
| AF-A8FPF0-F1-model_v4 | GT0 | 1 | 241 | 2 | 251 | 0.632 |
0.718 |
| AF-A0A5B9MTF2-F1-model_v4 | GT12 | 1 | 275 | 1 | 223 | 0.6213 |
0.736 |
| UFH54288.1 | GT2 | 1 | 267 | 4 | 246 | 0.6212 |
0.7312 |
| AF-A0A142Y833-F1-model_v4 | GT12 | 1 | 275 | 1 | 228 | 0.6171 |
0.723 |
| BDB98141.1 | GT2 | 5 | 284 | 1 | 308 | 0.6076 |
0.6635 |
| AF-A0A2U9ID99-F1-model_v4 | GT2 | 5 | 284 | 1 | 306 | 0.6074 |
0.663 |
| AF-A0A7H8RG88-F1-model_v4 | GT2 | 1 | 284 | 5 | 299 | 0.607 |
0.6564 |
| AF-B5L445-F1-model_v4 | GT2 | 2 | 281 | 1 | 290 | 0.6049 |
0.643 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UBM60722.1 | GT2 | 1 | 267 | 4 | 246 | 0.6352 |
0.7309 |
| A0A9X1TSK9 | GT2 | 1 | 268 | 11 | 250 | 0.626 |
0.7318 |
| UFH54288.1 | GT2 | 1 | 267 | 4 | 246 | 0.6212 |
0.7312 |
| A0A8D5U2D6 | GT2 | 5 | 282 | 1 | 297 | 0.6189 |
0.6706 |
| A0A517NDF8 | GT12 | 1 | 275 | 6 | 230 | 0.6141 |
0.7314 |
| BDB98141.1 | GT2 | 5 | 284 | 1 | 308 | 0.6076 |
0.6635 |
| A0A2I6S8Y1 | GT2 | 1 | 284 | 17 | 312 | 0.6022 |
0.6684 |
| A0A346ACF8 | GT2 | 1 | 279 | 4 | 275 | 0.5997 |
0.6446 |
| C6VXV3 | GT2 | 1 | 284 | 2 | 300 | 0.5994 |
0.6466 |
| UVI28640.1 | GT2 | 4 | 256 | 1 | 215 | 0.598 |
0.722 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1h7q-assembly1.cif.gz_A | 3 | 282 | 1 | 224 | 0.5772 |
0.6881 |
| 1qgs-assembly1.cif.gz_A | 3 | 282 | 1 | 222 | 0.5764 |
0.6901 |
| 1h7l-assembly1.cif.gz_A | 3 | 282 | 1 | 223 | 0.5762 |
0.688 |
| 4ayl-assembly1.cif.gz_A | 1 | 222 | 1 | 210 | 0.5723 |
0.6784 |
| 5tzi-assembly1.cif.gz_C | 3 | 276 | 1 | 262 | 0.5062 |
0.6087 |
| 2vs5-assembly2.cif.gz_B | 1 | 284 | 44 | 277 | 0.4973 |
0.6072 |
| 5tz8-assembly1.cif.gz_B | 3 | 277 | 1 | 262 | 0.4229 |
0.609 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q03084-F1-model_v4 | 1 | 259 | 4 | 275 | 0.5855 |
0.6499 |
| AF-P37782-F1-model_v4 | 1 | 283 | 1 | 296 | 0.5641 |
0.6038 |
| AF-P9WMX3-F1-model_v4 | 1 | 281 | 1 | 301 | 0.5608 |
0.6118 |
| AF-P9WMX2-F1-model_v4 | 1 | 281 | 1 | 301 | 0.5606 |
0.6114 |
| AF-P71054-F1-model_v4 | 1 | 269 | 3 | 254 | 0.5589 |
0.6396 |
| AF-P39614-F1-model_v4 | 1 | 259 | 1 | 249 | 0.5499 |
0.6255 |
| AF-Q9ZB73-F1-model_v4 | 1 | 278 | 1 | 295 | 0.5479 |
0.6272 |
| AF-B3VA59-F1-model_v4 | 1 | 282 | 1 | 321 | 0.5452 |
0.6045 |
| AF-P75302-F1-model_v4 | 1 | 278 | 1 | 295 | 0.5443 |
0.6239 |
| AF-P47306-F1-model_v4 | 1 | 276 | 1 | 257 | 0.5429 |
0.6311 |