Cluster: Rep_3552_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3552
- CGC Family ID: CGCFAM_07830
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_2098 | 2389727 | 2391244 | + | GH77 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_2099 | 2391431 | 2392210 | + | Dockerin_1 | Phage_lysozyme2 |
| NULL(UNKNOWN) | Rep_3552_c_1 | Rep_3552_c_1_2100 | 2392404 | 2393957 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3552_c_1 | Rep_3552_c_1_2101 | 2394031 | 2394813 | - | 3.A.1.3.14 |
| TC | Rep_3552_c_1 | Rep_3552_c_1_2102 | 2394828 | 2395487 | - | 3.A.1.3.12 |
Gene ID: Rep_3552_c_1_2098
Type: CAZyme
Location: 2389727 - 2391244 (+)
Type: CAZyme
Location: 2389727 - 2391244 (+)
Gene ID: Rep_3552_c_1_2099
Type: pfam
Location: 2391431 - 2392210 (+)
Type: pfam
Location: 2391431 - 2392210 (+)
Gene ID: Rep_3552_c_1_2100
Type:
Location: 2392404 - 2393957 (-)
Type:
Location: 2392404 - 2393957 (-)
Gene ID: Rep_3552_c_1_2101
Type: TC
Location: 2394031 - 2394813 (-)
Type: TC
Location: 2394031 - 2394813 (-)
Gene ID: Rep_3552_c_1_2102
Type: TC
Location: 2394828 - 2395487 (-)
Type: TC
Location: 2394828 - 2395487 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.