PROTEIN: Rep_3552_c_1_2100
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Protein File & Metadata
Source:
Rep_3552_c_1_2100.pdb
Genome ID:
Protein ID:
Rep_3552_c_1_2100
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Protein Sequence
MKKTAKILIS AILCLSVAFC SLMPAFASEP KTAFIVVSGM NTFPLYKDNE KVFPTSTKAI 60 LKLASKIVLP LVEFFKDGDY DKLGDALFPA ATEAFDDISC NPDGSSKYNV TTDVFPLSAG 120 NYPEAFMNEV KDEGGVVKAG IETFGADNTY FFNYDWRLDP LKHADELNKF IRTVKAETKC 180 DRVALSAFSM GGTVICSYLY KYGSADVNSV SLCSTAFQGT SCMGSMFSGD MSIDAYGLIR 240 RMAQLTRNDF LDELIMFLNN SLESYKVNTS IDGYINNILT NLNDRLYKEL IIPVFGYMPG 300 LWDLVDAENY EKAKEIMLAD ADSALIKSID EYHRNVQARA YDILKAAEKD TTVYITAQYN 360 LQGLPISESS TTSNNDFLID VNYASGGAIC SKLDEMLPEG YTQAKPDGHN HLSADRQLDA 420 STCMFPEQTW FIRDMAHVDY NVGESTDFLI WLAKSEKQLT VHDSESYPQF MKYDSKTNTL 480 SPVTDELLKP TVVSQIFAFL AKLVKLSADI LFSIILK 517
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q10PI6-F1-model_v4 | 24 | 486 | 22 | 428 | 0.5586 |
0.6553 |
| AF-I1N411-F1-model_v4 | 18 | 455 | 7 | 422 | 0.546 |
0.6346 |
| AF-A0A1D6I8G6-F1-model_v4 | 14 | 455 | 25 | 446 | 0.5362 |
0.6305 |
| AF-Q93V61-F1-model_v4 | 26 | 455 | 18 | 428 | 0.5319 |
0.6264 |
| AF-A0A1D6HK38-F1-model_v4 | 1 | 486 | 2 | 472 | 0.5226 |
0.5924 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D9SR31-F1-model_v4 | CBM3 | 29 | 466 | 31 | 544 | 0.4399 |
0.5926 |
| AF-A0A173N062-F1-model_v4 | CBM3 | 27 | 488 | 29 | 621 | 0.438 |
0.5616 |
| AF-W0U333-F1-model_v4 | CBM3 | 24 | 517 | 374 | 947 | 0.4087 |
0.5816 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q10PI6-F1-model_v4 | 24 | 486 | 22 | 428 | 0.5586 |
0.6553 |
| AF-Q93V61-F1-model_v4 | 26 | 455 | 18 | 428 | 0.5319 |
0.6264 |