Cluster: Rep_3501_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3501
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3501_c_19 | Rep_3501_c_19_4 | 3314 | 5527 | + | GH95 |
| pfam | Rep_3501_c_19 | Rep_3501_c_19_5 | 6103 | 7077 | + | ROK |
| TC | Rep_3501_c_19 | Rep_3501_c_19_6 | 7074 | 8642 | + | 2.A.2.3.6 |
| pfam | Rep_3501_c_19 | Rep_3501_c_19_7 | 8806 | 10863 | + | DUF5054 |
| NULL(UNKNOWN) | Rep_3501_c_19 | Rep_3501_c_19_8 | 10860 | 12833 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3501_c_19 | Rep_3501_c_19_9 | 12830 | 15841 | + | GH2 |
Gene ID: Rep_3501_c_19_4
Type: CAZyme
Location: 3314 - 5527 (+)
Type: CAZyme
Location: 3314 - 5527 (+)
Gene ID: Rep_3501_c_19_5
Type: pfam
Location: 6103 - 7077 (+)
Type: pfam
Location: 6103 - 7077 (+)
Gene ID: Rep_3501_c_19_6
Type: TC
Location: 7074 - 8642 (+)
Type: TC
Location: 7074 - 8642 (+)
Gene ID: Rep_3501_c_19_7
Type: pfam
Location: 8806 - 10863 (+)
Type: pfam
Location: 8806 - 10863 (+)
Gene ID: Rep_3501_c_19_8
Type:
Location: 10860 - 12833 (+)
Type:
Location: 10860 - 12833 (+)
Gene ID: Rep_3501_c_19_9
Type: CAZyme
Location: 12830 - 15841 (+)
Type: CAZyme
Location: 12830 - 15841 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp017886765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.