PROTEIN: Rep_3501_c_19_8
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Protein File & Metadata
Source:
Rep_3501_c_19_8.pdb
Genome ID:
Protein ID:
Rep_3501_c_19_8
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Protein Sequence
MKWIYKKPKI FPFWVKFKGN EAQKDYYSLT DDGIVCSLRD VKLPYFNHIE MSGFETSSII 60 SYRIDRNKKL KLYRFCVFPQ IRVIPNETRG SLSRNFKGVD ISFGSSVVTD KIKFNGLLTF 120 FQTAGAFEIT HTICPAYNKK ALIEKFTVKN TGNVSQAIRI NNKTPYEYLN KVFFADNKGQ 180 TLFTSVCCER RLLKNQKEKI NIEPNEEKIF FVCSAAEELT EDQITGQFAC RKEFLSRQKG 240 FMKINTPDKL INAMTEFCKI RASESIFSTK NGLMHAPGGG NYYGALWTND QCEYANPLFA 300 YLGYPAGKEQ SINCYKLFSK FADKNKAIPT SIIACGDDIW NGAGDRGDSS MFLYGLSRYL 360 LSTGDREKAV EFLPYIMTAQ EYVESKITDE GIVKSDSDEL ENRFESGKAN LSTACITYDA 420 FLSLSYLYRE LGKKELSEKA LCNADKIKNG IEQYFGAAVE GYDTYRYCEE EKHLRSWICL 480 PLVVGIDNRK QRTVEALLSD KLFTGKGMLT RSGQRTYWDR SLLYSLRGIF YAGEAGKAYD 540 LLLKYTKERL LGFHAPYPVE AFPEGNAAQL SAESALYLRI FTEGILGYRP VGFRSFEIKP 600 ALPDNWDYFE VKNMELCGKS VDVFIKNGDF YSVKLDDQEI SIEKGNKYIF TLNGGKI 657
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D3ZY02-F1-model_v4 | 27 | 657 | 4 | 697 | 0.7177 |
0.7833 |
| AF-Q8BP56-F1-model_v4 | 28 | 655 | 4 | 690 | 0.7171 |
0.7829 |
| AF-A0A175W6Z5-F1-model_v4 | 24 | 656 | 5 | 780 | 0.7166 |
0.8209 |
| AF-U7PID1-F1-model_v4 | 25 | 656 | 7 | 807 | 0.7118 |
0.8274 |
| AF-Q9VKD9-F1-model_v4 | 28 | 654 | 21 | 739 | 0.7078 |
0.7963 |
| AF-Q54KX5-F1-model_v4 | 27 | 657 | 18 | 713 | 0.7065 |
0.7788 |
| AF-Q59005-F1-model_v4 | 41 | 597 | 1 | 615 | 0.7035 |
0.8101 |
| AF-Q32M88-F1-model_v4 | 27 | 655 | 3 | 691 | 0.7003 |
0.7848 |
| AF-A0A133CSL2-F1-model_v4 | 28 | 655 | 9 | 688 | 0.697 |
0.7652 |
| AF-Q10211-F1-model_v4 | 9 | 629 | 11 | 649 | 0.6928 |
0.7394 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B2Z0H3-F1-model_v4 | CBM0 | 20 | 654 | 25 | 877 | 0.8051 |
0.9551 |
| AF-A0A6N0NT66-F1-model_v4 | GH0 | 33 | 647 | 1 | 593 | 0.7523 |
0.8023 |
| AF-C9RC19-F1-model_v4 | GH15 | 24 | 649 | 1 | 609 | 0.7492 |
0.789 |
| AF-A0A5Q0UEW1-F1-model_v4 | GH0 | 32 | 642 | 1 | 589 | 0.7461 |
0.7986 |
| AF-A0A1Q2MCY1-F1-model_v4 | GH94 | 23 | 656 | 3 | 752 | 0.7446 |
0.8367 |
| AF-A0A1D8MRH3-F1-model_v4 | GH0 | 31 | 645 | 3 | 598 | 0.7442 |
0.7936 |
| QYY36758.1 | GH94 | 22 | 655 | 2 | 746 | 0.743 |
0.8326 |
| AF-A0A089MMR2-F1-model_v4 | GH94 | 23 | 656 | 4 | 758 | 0.7398 |
0.8346 |
| AF-A0A089LI24-F1-model_v4 | GH94 | 23 | 656 | 1 | 759 | 0.7398 |
0.8342 |
| AF-A0A7U4HGB1-F1-model_v4 | GH94 | 23 | 656 | 4 | 758 | 0.7387 |
0.8336 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WFB35204.1 | GH94 | 22 | 655 | 1 | 754 | 0.7524 |
0.841 |
| C9RC19 | GH15 | 24 | 649 | 1 | 609 | 0.7492 |
0.789 |
| A0A1Q2MCY1 | GH94 | 23 | 656 | 3 | 752 | 0.7446 |
0.8367 |
| QYY36758.1 | GH94 | 22 | 655 | 2 | 746 | 0.743 |
0.8326 |
| A3Z095 | GH176 | 14 | 644 | 2 | 706 | 0.7407 |
0.8101 |
| A0A089LI24 | GH94 | 23 | 656 | 1 | 759 | 0.7398 |
0.8342 |
| A0A482D4L9 | GH94 | 23 | 656 | 4 | 778 | 0.7382 |
0.8418 |
| WFB37418.1 | GH94 | 21 | 655 | 10 | 757 | 0.737 |
0.8291 |
| F9VLH0 | GH94 | 23 | 656 | 3 | 771 | 0.7368 |
0.8376 |
| C7NNE0 | GH94 | 22 | 656 | 1 | 775 | 0.7367 |
0.8373 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1v7v-assembly1.cif.gz_A | 22 | 656 | 1 | 768 | 0.7345 |
0.8325 |
| 8bou-assembly1.cif.gz_A | 21 | 656 | 1 | 797 | 0.7228 |
0.8305 |
| 3s4b-assembly1.cif.gz_A | 24 | 656 | 1 | 813 | 0.722 |
0.8392 |
| 3afj-assembly1.cif.gz_B | 24 | 656 | 1 | 813 | 0.7215 |
0.8388 |
| 8ho8-assembly1.cif.gz_B | 24 | 656 | 1 | 799 | 0.7213 |
0.8333 |
| 3acs-assembly1.cif.gz_B | 24 | 656 | 1 | 813 | 0.7209 |
0.838 |
| 3act-assembly1.cif.gz_A | 24 | 656 | 1 | 813 | 0.7205 |
0.8378 |
| 3qde-assembly1.cif.gz_B | 22 | 656 | 1 | 800 | 0.7203 |
0.8306 |
| 2cqt-assembly1.cif.gz_A | 24 | 656 | 1 | 813 | 0.7201 |
0.8372 |
| 8ho9-assembly1.cif.gz_A | 22 | 656 | 1 | 800 | 0.72 |
0.8304 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q76IQ9-F1-model_v4 | 22 | 656 | 1 | 790 | 0.7292 |
0.8362 |
| AF-Q9F8X1-F1-model_v4 | 22 | 656 | 1 | 790 | 0.7287 |
0.8354 |
| AF-B9K7M6-F1-model_v4 | 24 | 656 | 1 | 803 | 0.7237 |
0.8375 |
| AF-Q7S0S2-F1-model_v4 | 25 | 656 | 7 | 781 | 0.718 |
0.8231 |
| AF-Q8P3J4-F1-model_v4 | 22 | 656 | 9 | 787 | 0.7178 |
0.8221 |
| AF-Q8BP56-F1-model_v4 | 28 | 655 | 4 | 690 | 0.7171 |
0.7829 |
| AF-F1NZI4-F1-model_v4 | 28 | 655 | 16 | 699 | 0.7126 |
0.7837 |
| AF-Q54KX5-F1-model_v4 | 27 | 657 | 18 | 713 | 0.7065 |
0.7788 |
| AF-Q4J9D4-F1-model_v4 | 15 | 602 | 1 | 576 | 0.7063 |
0.7628 |
| AF-Q59005-F1-model_v4 | 41 | 597 | 1 | 615 | 0.7035 |
0.8101 |