Cluster: Rep_3486_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3486
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3486_c_15 | Rep_3486_c_15_40 | 48900 | 50960 | - | GH3 |
| pfam | Rep_3486_c_15 | Rep_3486_c_15_41 | 50991 | 52085 | - | MMR_HSR1 | FeoB_N | YchF-GTPase_C |
| NULL(UNKNOWN) | Rep_3486_c_15 | Rep_3486_c_15_42 | 52214 | 52435 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3486_c_15 | Rep_3486_c_15_43 | 52486 | 55296 | - | 3.A.1.137.2 |
Gene ID: Rep_3486_c_15_40
Type: CAZyme
Location: 48900 - 50960 (-)
Type: CAZyme
Location: 48900 - 50960 (-)
Gene ID: Rep_3486_c_15_41
Type: pfam
Location: 50991 - 52085 (-)
Type: pfam
Location: 50991 - 52085 (-)
Gene ID: Rep_3486_c_15_42
Type:
Location: 52214 - 52435 (-)
Type:
Location: 52214 - 52435 (-)
Gene ID: Rep_3486_c_15_43
Type: TC
Location: 52486 - 55296 (-)
Type: TC
Location: 52486 - 55296 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp900752625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.