Cluster: Rep_3486_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3486
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3486_c_14 | Rep_3486_c_14_20 | 21251 | 22003 | - | 3.A.1.132.8 |
| TF | Rep_3486_c_14 | Rep_3486_c_14_21 | 22451 | 22747 | + | HTH_3 |
| CAZyme | Rep_3486_c_14 | Rep_3486_c_14_22 | 23247 | 24734 | + | GH77 |
| CAZyme | Rep_3486_c_14 | Rep_3486_c_14_23 | 24768 | 27134 | + | GT35 |
| peptidase | Rep_3486_c_14 | Rep_3486_c_14_24 | 27235 | 28797 | + | M38.UNW |
| TC | Rep_3486_c_14 | Rep_3486_c_14_25 | 28974 | 29573 | + | 2.A.115.2.14 |
Gene ID: Rep_3486_c_14_20
Type: TC
Location: 21251 - 22003 (-)
Type: TC
Location: 21251 - 22003 (-)
Gene ID: Rep_3486_c_14_21
Type: TF
Location: 22451 - 22747 (+)
Type: TF
Location: 22451 - 22747 (+)
Gene ID: Rep_3486_c_14_22
Type: CAZyme
Location: 23247 - 24734 (+)
Type: CAZyme
Location: 23247 - 24734 (+)
Gene ID: Rep_3486_c_14_23
Type: CAZyme
Location: 24768 - 27134 (+)
Type: CAZyme
Location: 24768 - 27134 (+)
Gene ID: Rep_3486_c_14_24
Type: peptidase
Location: 27235 - 28797 (+)
Type: peptidase
Location: 27235 - 28797 (+)
Gene ID: Rep_3486_c_14_25
Type: TC
Location: 28974 - 29573 (+)
Type: TC
Location: 28974 - 29573 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp900752625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.