Cluster: Rep_3486_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3486
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3486_c_25 | Rep_3486_c_25_22 | 22266 | 23294 | - | GH5_8 |
| pfam | Rep_3486_c_25 | Rep_3486_c_25_23 | 23648 | 23962 | + | Thioredoxin | Thioredoxin_2 | Thioredoxin_3 |
| TC | Rep_3486_c_25 | Rep_3486_c_25_24 | 24497 | 25015 | + | 3.D.1.5.1 |
| TC | Rep_3486_c_25 | Rep_3486_c_25_25 | 25012 | 26904 | + | 3.D.1.5.1 |
| TC | Rep_3486_c_25 | Rep_3486_c_25_26 | 26926 | 28674 | + | 3.D.1.5.1 |
Gene ID: Rep_3486_c_25_22
Type: CAZyme
Location: 22266 - 23294 (-)
Type: CAZyme
Location: 22266 - 23294 (-)
Gene ID: Rep_3486_c_25_23
Type: pfam
Location: 23648 - 23962 (+)
Type: pfam
Location: 23648 - 23962 (+)
Gene ID: Rep_3486_c_25_24
Type: TC
Location: 24497 - 25015 (+)
Type: TC
Location: 24497 - 25015 (+)
Gene ID: Rep_3486_c_25_25
Type: TC
Location: 25012 - 26904 (+)
Type: TC
Location: 25012 - 26904 (+)
Gene ID: Rep_3486_c_25_26
Type: TC
Location: 26926 - 28674 (+)
Type: TC
Location: 26926 - 28674 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp900752625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.