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Cluster: Rep_3473_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3473_c_2 Rep_3473_c_2_788 848525 850528 + 9.A.8.1.6
NULL(UNKNOWN) Rep_3473_c_2 Rep_3473_c_2_789 850598 850756 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_3473_c_2 Rep_3473_c_2_790 850759 851406 + QueH
CAZyme Rep_3473_c_2 Rep_3473_c_2_791 851411 852364 + GH113
TC Rep_3473_c_2 Rep_3473_c_2_792 852636 853871 + 3.A.1.4.10
TC Rep_3473_c_2 Rep_3473_c_2_793 854055 854936 + 3.A.1.4.10
TC Rep_3473_c_2 Rep_3473_c_2_794 854949 856022 + 3.A.1.4.8
TC Rep_3473_c_2 Rep_3473_c_2_795 856019 856789 + 3.A.1.4.10
TC Rep_3473_c_2 Rep_3473_c_2_796 856803 857513 + 3.A.1.4.10
TC Rep_3473_c_2 Rep_3473_c_2_797 857526 858143 + 2.A.115.2.14
TC Rep_3473_c_2 Rep_3473_c_2_798 858447 859847 + 2.A.6.4.2
TC Rep_3473_c_2 Rep_3473_c_2_799 859840 860802 + 2.A.6.4.2
pfam Rep_3473_c_2 Rep_3473_c_2_800 860967 862340 + tRNA-synt_2b | HGTP_anticodon
TF Rep_3473_c_2 Rep_3473_c_2_801 862443 862766 - HTH_3
TC Rep_3473_c_2 Rep_3473_c_2_802 863049 865130 - 4.A.1.1.14
Gene ID: Rep_3473_c_2_788
Type: TC
Location: 848525 - 850528 (+)
Gene ID: Rep_3473_c_2_789
Type:
Location: 850598 - 850756 (+)
Gene ID: Rep_3473_c_2_790
Type: pfam
Location: 850759 - 851406 (+)
Gene ID: Rep_3473_c_2_791
Type: CAZyme
Location: 851411 - 852364 (+)
Gene ID: Rep_3473_c_2_792
Type: TC
Location: 852636 - 853871 (+)
Gene ID: Rep_3473_c_2_793
Type: TC
Location: 854055 - 854936 (+)
Gene ID: Rep_3473_c_2_794
Type: TC
Location: 854949 - 856022 (+)
Gene ID: Rep_3473_c_2_795
Type: TC
Location: 856019 - 856789 (+)
Gene ID: Rep_3473_c_2_796
Type: TC
Location: 856803 - 857513 (+)
Gene ID: Rep_3473_c_2_797
Type: TC
Location: 857526 - 858143 (+)
Gene ID: Rep_3473_c_2_798
Type: TC
Location: 858447 - 859847 (+)
Gene ID: Rep_3473_c_2_799
Type: TC
Location: 859840 - 860802 (+)
Gene ID: Rep_3473_c_2_800
Type: pfam
Location: 860967 - 862340 (+)
Gene ID: Rep_3473_c_2_801
Type: TF
Location: 862443 - 862766 (-)
Gene ID: Rep_3473_c_2_802
Type: TC
Location: 863049 - 865130 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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