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Cluster: Rep_3473_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3473_c_1 Rep_3473_c_1_1073 1179315 1181174 - CBM48 | GH13_9
pfam Rep_3473_c_1 Rep_3473_c_1_1074 1181429 1182610 + Eno-Rase_FAD_bd | Enoyl_reductase | Eno-Rase_NADH_b
TC Rep_3473_c_1 Rep_3473_c_1_1075 1183373 1183783 - 3.A.2.1.2
TC Rep_3473_c_1 Rep_3473_c_1_1076 1183798 1185201 - 3.A.2.1.5
TC Rep_3473_c_1 Rep_3473_c_1_1077 1185282 1186151 - 3.A.2.1.5
TC Rep_3473_c_1 Rep_3473_c_1_1078 1186191 1187726 - 3.A.2.1.5
TC Rep_3473_c_1 Rep_3473_c_1_1079 1187792 1188334 - 3.A.2.1.5
pfam Rep_3473_c_1 Rep_3473_c_1_1080 1188355 1188855 - ATP-synt_B
TC Rep_3473_c_1 Rep_3473_c_1_1081 1188893 1189171 - 3.A.2.1.2
TC Rep_3473_c_1 Rep_3473_c_1_1082 1189243 1189971 - 3.A.2.1.5
Gene ID: Rep_3473_c_1_1073
Type: CAZyme
Location: 1179315 - 1181174 (-)
Gene ID: Rep_3473_c_1_1074
Type: pfam
Location: 1181429 - 1182610 (+)
Gene ID: Rep_3473_c_1_1075
Type: TC
Location: 1183373 - 1183783 (-)
Gene ID: Rep_3473_c_1_1076
Type: TC
Location: 1183798 - 1185201 (-)
Gene ID: Rep_3473_c_1_1077
Type: TC
Location: 1185282 - 1186151 (-)
Gene ID: Rep_3473_c_1_1078
Type: TC
Location: 1186191 - 1187726 (-)
Gene ID: Rep_3473_c_1_1079
Type: TC
Location: 1187792 - 1188334 (-)
Gene ID: Rep_3473_c_1_1080
Type: pfam
Location: 1188355 - 1188855 (-)
Gene ID: Rep_3473_c_1_1081
Type: TC
Location: 1188893 - 1189171 (-)
Gene ID: Rep_3473_c_1_1082
Type: TC
Location: 1189243 - 1189971 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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