Cluster: Rep_3467_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3467
- CGC Family ID: CGCFAM_03609
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3467_c_14 | Rep_3467_c_14_9 | 9856 | 12180 | - | GH74 | GH74 |
| NULL(UNKNOWN) | Rep_3467_c_14 | Rep_3467_c_14_10 | 13008 | 14396 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3467_c_14 | Rep_3467_c_14_11 | 14457 | 15395 | - | EamA | EamA |
| TC | Rep_3467_c_14 | Rep_3467_c_14_12 | 15586 | 16152 | + | 4.F.1.1.7 |
| TC | Rep_3467_c_14 | Rep_3467_c_14_13 | 16197 | 17549 | - | 2.A.25.1.3 |
| TC | Rep_3467_c_14 | Rep_3467_c_14_14 | 17791 | 18648 | + | 3.A.1.103.4 |
| TC | Rep_3467_c_14 | Rep_3467_c_14_15 | 18661 | 19503 | + | 3.A.1.103.1 |
Gene ID: Rep_3467_c_14_9
Type: CAZyme
Location: 9856 - 12180 (-)
Type: CAZyme
Location: 9856 - 12180 (-)
Gene ID: Rep_3467_c_14_10
Type:
Location: 13008 - 14396 (+)
Type:
Location: 13008 - 14396 (+)
Gene ID: Rep_3467_c_14_11
Type: pfam
Location: 14457 - 15395 (-)
Type: pfam
Location: 14457 - 15395 (-)
Gene ID: Rep_3467_c_14_12
Type: TC
Location: 15586 - 16152 (+)
Type: TC
Location: 15586 - 16152 (+)
Gene ID: Rep_3467_c_14_13
Type: TC
Location: 16197 - 17549 (-)
Type: TC
Location: 16197 - 17549 (-)
Gene ID: Rep_3467_c_14_14
Type: TC
Location: 17791 - 18648 (+)
Type: TC
Location: 17791 - 18648 (+)
Gene ID: Rep_3467_c_14_15
Type: TC
Location: 18661 - 19503 (+)
Type: TC
Location: 18661 - 19503 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Species
UMGS1601 sp900553335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.