PROTEIN: Rep_3467_c_14_10
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Protein File & Metadata
Source:
Rep_3467_c_14_10.pdb
Genome ID:
Protein ID:
Rep_3467_c_14_10
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Protein Sequence
MKNTSNIKRT LIGTAAVVIS ITTLSSCKDS KTNSNDVSLD TDQGKVLNIY CENLEFQETF 60 AMYYIPHADR KVLEDVEMNW ILPESEDETH LSVLNKSIEN QNDLPTDEKI DLFIVDMDKV 120 EKLVNSDVAV PVSELGITED DLKNQYDYTK QVFTNQRGEL IGVTWEATPG LYFYRVDIAE 180 AVLGTSDPDE VQAYISDLDK FTDLAAKMKE NGYRILSGYD DMYELFSSNM TAPWVTDGKI 240 TIDEKLKQWI DLTKKYTDSG YNNNTSLGDD SWFDDMNKTS NVFGYFFSTW GSNFPLPDAT 300 VDEKIRSDGS NAIAGNGLYG QWRACTGPVP YVFGGTGLIA CQGTDNQELI KDIMLNLTCN 360 TEAMKAMTEN GHCFSNNKEA NRQLIDSGYE NTFLGGQNHL SLLDATADKI SFNGNLSAYD 420 QYLSKKLKSN MMLYFNGSKT YDEALDSFYS DINEIYPAIP HE 462
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 40 | 459 | 43 | 439 | 0.7103 |
0.817 |
| AF-K0EWS5-F1-model_v4 | 41 | 462 | 24 | 457 | 0.7092 |
0.7872 |
| AF-K0EWS9-F1-model_v4 | 38 | 460 | 46 | 463 | 0.7056 |
0.7938 |
| AF-P76042-F1-model_v4 | 39 | 459 | 24 | 430 | 0.7055 |
0.7883 |
| AF-P71619-F1-model_v4 | 42 | 460 | 34 | 428 | 0.7016 |
0.8091 |
| AF-Q8DNN7-F1-model_v4 | 12 | 460 | 24 | 435 | 0.6992 |
0.7784 |
| AF-A0A133CPC5-F1-model_v4 | 39 | 461 | 30 | 423 | 0.6986 |
0.797 |
| AF-K0F2E6-F1-model_v4 | 42 | 460 | 41 | 436 | 0.6983 |
0.8089 |
| AF-Q7AQ51-F1-model_v4 | 10 | 460 | 22 | 445 | 0.6934 |
0.7584 |
| AF-A0A132Z3C8-F1-model_v4 | 20 | 458 | 25 | 428 | 0.6917 |
0.7762 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 460 | 379 | 866 | 0.5491 |
0.7234 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 460 | 379 | 866 | 0.5491 |
0.7234 |
| A0A7U1BNH7 | GH10 | 41 | 462 | 27 | 735 | 0.537 |
0.7257 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 41 | 457 | 1 | 393 | 0.8193 |
0.8983 |
| 3uor-assembly2.cif.gz_B | 45 | 460 | 1 | 388 | 0.7544 |
0.8427 |
| 6x84-assembly2.cif.gz_B | 41 | 460 | 1 | 411 | 0.7397 |
0.8025 |
| 7c0k-assembly1.cif.gz_A | 13 | 459 | 4 | 396 | 0.7389 |
0.8184 |
| 7c0x-assembly2.cif.gz_B | 13 | 459 | 3 | 395 | 0.7373 |
0.8159 |
| 7c0s-assembly1.cif.gz_A | 13 | 459 | 4 | 396 | 0.7369 |
0.8165 |
| 7c0o-assembly2.cif.gz_B | 13 | 459 | 4 | 397 | 0.7369 |
0.8157 |
| 7c19-assembly2.cif.gz_B | 13 | 459 | 4 | 396 | 0.7368 |
0.8165 |
| 7c0t-assembly2.cif.gz_B | 13 | 459 | 4 | 396 | 0.7366 |
0.8162 |
| 7c0w-assembly1.cif.gz_A | 13 | 459 | 4 | 396 | 0.7363 |
0.8159 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P94528-F1-model_v4 | 18 | 458 | 27 | 433 | 0.7527 |
0.839 |
| AF-P29822-F1-model_v4 | 41 | 458 | 25 | 422 | 0.7523 |
0.846 |
| AF-Q9KEE7-F1-model_v4 | 11 | 460 | 15 | 445 | 0.7332 |
0.7885 |
| AF-Q9K491-F1-model_v4 | 36 | 459 | 31 | 424 | 0.7141 |
0.816 |
| AF-P76042-F1-model_v4 | 39 | 459 | 24 | 430 | 0.7055 |
0.7883 |
| AF-Q8FVS7-F1-model_v4 | 41 | 460 | 22 | 411 | 0.6981 |
0.7943 |
| AF-Q578M8-F1-model_v4 | 41 | 460 | 22 | 411 | 0.6979 |
0.7941 |
| AF-Q2YKZ9-F1-model_v4 | 41 | 460 | 22 | 411 | 0.6969 |
0.793 |
| AF-O31518-F1-model_v4 | 35 | 459 | 26 | 427 | 0.6914 |
0.78 |
| AF-Q55471-F1-model_v4 | 41 | 459 | 27 | 421 | 0.6896 |
0.783 |