Cluster: Rep_3460_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3460
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3460_c_128 | Rep_3460_c_128_2 | 741 | 1499 | - | 3.A.1.103.1 |
| pfam | Rep_3460_c_128 | Rep_3460_c_128_3 | 1514 | 2869 | - | ABC2_membrane |
| CAZyme | Rep_3460_c_128 | Rep_3460_c_128_4 | 3042 | 3833 | - | GT2 |
| NULL(UNKNOWN) | Rep_3460_c_128 | Rep_3460_c_128_5 | 3824 | 5158 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3460_c_128 | Rep_3460_c_128_6 | 5145 | 6323 | - | GT4 |
Gene ID: Rep_3460_c_128_2
Type: TC
Location: 741 - 1499 (-)
Type: TC
Location: 741 - 1499 (-)
Gene ID: Rep_3460_c_128_3
Type: pfam
Location: 1514 - 2869 (-)
Type: pfam
Location: 1514 - 2869 (-)
Gene ID: Rep_3460_c_128_4
Type: CAZyme
Location: 3042 - 3833 (-)
Type: CAZyme
Location: 3042 - 3833 (-)
Gene ID: Rep_3460_c_128_5
Type:
Location: 3824 - 5158 (-)
Type:
Location: 3824 - 5158 (-)
Gene ID: Rep_3460_c_128_6
Type: CAZyme
Location: 5145 - 6323 (-)
Type: CAZyme
Location: 5145 - 6323 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.