PROTEIN: Rep_3460_c_128_5
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Protein File & Metadata
Source:
Rep_3460_c_128_5.pdb
Genome ID:
Protein ID:
Rep_3460_c_128_5
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Protein Sequence
MKTDKYRKLL SRCPALLYAA EKAAAENNDA LAQVTAYVTA PVLFCYVRYI LDCAAEQNIH 60 RIYFLSRDGY ILKQIADIIT ESENLPIQTR YLYVSRYSLR NALYYKCDSA EDFERAGFFG 120 HCAVQSAENT LKRAGLNESQ RLEVYKNTGF GGDEKRIMND REYNDFCNEL KKDKCLFESI 180 KKQAEEKYRN IILYFEQNGL LDNEKKALVD SGWLGSVQRT LTELISDKTD INNIVGFYFG 240 LYRKKDDSYR SFLFDISDAH KYVPTFCNNL FECFCSAPHG MTTGYELSGG KAVPVTAAAD 300 PKLVKAADTQ IKTAVRFTRF VCEKHNDISK EMLRRISFQL IKQLMYKPDK QEAKILGEFP 360 FCDDVTEIRT QPLACNCGGS INNILFINRI LRKRKGLSIY PESGMYWLYG SIVLTCCKPA 420 RVYRMSVRLW EKLRLIKEKR KICR 444
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 5 | 424 | 7 | 631 | 0.653 |
0.8157 |
| AF-Q0P8I2-F1-model_v4 | 1 | 433 | 575 | 975 | 0.4717 |
0.728 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 7 | 441 | 638 | 1091 | 0.5924 |
0.8611 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 7 | 440 | 617 | 1067 | 0.5901 |
0.8545 |
| A0A974WXG9 | GT4 | 2 | 430 | 642 | 1078 | 0.5853 |
0.8648 |
| A0A1I7GMF6 | GT2 | 7 | 436 | 633 | 1083 | 0.5839 |
0.8565 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 27 | 430 | 9 | 403 | 0.5691 |
0.7694 |
| V4JBH5 | GT2 | 1 | 433 | 1 | 398 | 0.5495 |
0.7818 |
| QRK05458.1 | GT4 | 9 | 444 | 249 | 992 | 0.5484 |
0.8144 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 21 | 433 | 4 | 405 | 0.548 |
0.7837 |
| A0A9J7AXY3 | GT2 | 27 | 439 | 7 | 402 | 0.5471 |
0.7731 |
| A6M2M4 | GT2 | 1 | 444 | 212 | 917 | 0.5329 |
0.8067 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 7 | 440 | 617 | 1067 | 0.5901 |
0.8545 |
| A0A974WXG9 | GT4 | 2 | 430 | 642 | 1078 | 0.5853 |
0.8648 |
| A0A1I7GMF6 | GT2 | 7 | 436 | 633 | 1083 | 0.5839 |
0.8565 |
| A0A0U5F758 | GT2 | 27 | 430 | 9 | 403 | 0.5691 |
0.7694 |
| V4JBH5 | GT2 | 1 | 433 | 1 | 398 | 0.5495 |
0.7818 |
| QRK05458.1 | GT4 | 9 | 444 | 249 | 992 | 0.5484 |
0.8144 |
| A0A0H3KC95 | GT2 | 21 | 433 | 4 | 405 | 0.548 |
0.7837 |
| A0A9J7AXY3 | GT2 | 27 | 439 | 7 | 402 | 0.5471 |
0.7731 |
| A6M2M4 | GT2 | 1 | 444 | 212 | 917 | 0.5329 |
0.8067 |
| W8KPG0 | GT2 | 2 | 435 | 2 | 399 | 0.5323 |
0.7785 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 10 | 359 | 241 | 591 | 0.5814 |
0.8373 |
| 8a0m-assembly1.cif.gz_B | 2 | 426 | 459 | 877 | 0.5451 |
0.79 |
| 8a0c-assembly1.cif.gz_A | 2 | 429 | 597 | 1028 | 0.5393 |
0.8007 |
| 8a0m-assembly2.cif.gz_C | 2 | 429 | 593 | 1024 | 0.5382 |
0.7982 |
| 8a0m-assembly1.cif.gz_A | 2 | 426 | 592 | 1024 | 0.5377 |
0.8028 |
| 8a0c-assembly1.cif.gz_B | 2 | 426 | 597 | 1026 | 0.5338 |
0.7971 |
| 8a0m-assembly2.cif.gz_D | 2 | 428 | 488 | 886 | 0.5161 |
0.784 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.