Cluster: Rep_342_CGC9
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_342
- CGC Family ID: CGCFAM_08218
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_342_c_1 | Rep_342_c_1_199 | 208690 | 209811 | + | 9.B.146.1.4 |
| pfam | Rep_342_c_1 | Rep_342_c_1_200 | 209842 | 210651 | + | Poly_export | SLBB_2 |
| TC | Rep_342_c_1 | Rep_342_c_1_201 | 210689 | 213118 | + | 8.A.3.3.4 |
| TC | Rep_342_c_1 | Rep_342_c_1_202 | 213144 | 214682 | + | 2.A.66.1.40 |
| CAZyme | Rep_342_c_1 | Rep_342_c_1_203 | 214727 | 215890 | + | GT4 |
| NULL(UNKNOWN) | Rep_342_c_1 | Rep_342_c_1_204 | 215899 | 217005 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_342_c_1 | Rep_342_c_1_205 | 217006 | 217569 | + | Hexapep |
| CAZyme | Rep_342_c_1 | Rep_342_c_1_206 | 217554 | 218306 | + | GT32 |
| CAZyme | Rep_342_c_1 | Rep_342_c_1_207 | 218322 | 219539 | + | GT4 |
| STP | Rep_342_c_1 | Rep_342_c_1_208 | 219566 | 220204 | + | PIG-L |
| CAZyme | Rep_342_c_1 | Rep_342_c_1_209 | 220201 | 221322 | + | GT4 |
| pfam | Rep_342_c_1 | Rep_342_c_1_210 | 221319 | 222605 | + | Wzy_C |
| CAZyme | Rep_342_c_1 | Rep_342_c_1_211 | 222605 | 223531 | + | GT2 |
| pfam | Rep_342_c_1 | Rep_342_c_1_212 | 223531 | 224034 | + | Hexapep |
| CAZyme | Rep_342_c_1 | Rep_342_c_1_213 | 224043 | 225206 | + | GT4 |
| pfam | Rep_342_c_1 | Rep_342_c_1_214 | 225304 | 226419 | + | Acyl_transf_3 |
| pfam | Rep_342_c_1 | Rep_342_c_1_215 | 226480 | 227532 | + | Acyl_transf_3 |
| CAZyme | Rep_342_c_1 | Rep_342_c_1_216 | 227590 | 228333 | + | GT26 |
Gene ID: Rep_342_c_1_199
Type: TC
Location: 208690 - 209811 (+)
Type: TC
Location: 208690 - 209811 (+)
Gene ID: Rep_342_c_1_200
Type: pfam
Location: 209842 - 210651 (+)
Type: pfam
Location: 209842 - 210651 (+)
Gene ID: Rep_342_c_1_201
Type: TC
Location: 210689 - 213118 (+)
Type: TC
Location: 210689 - 213118 (+)
Gene ID: Rep_342_c_1_202
Type: TC
Location: 213144 - 214682 (+)
Type: TC
Location: 213144 - 214682 (+)
Gene ID: Rep_342_c_1_203
Type: CAZyme
Location: 214727 - 215890 (+)
Type: CAZyme
Location: 214727 - 215890 (+)
Gene ID: Rep_342_c_1_204
Type:
Location: 215899 - 217005 (+)
Type:
Location: 215899 - 217005 (+)
Gene ID: Rep_342_c_1_205
Type: pfam
Location: 217006 - 217569 (+)
Type: pfam
Location: 217006 - 217569 (+)
Gene ID: Rep_342_c_1_206
Type: CAZyme
Location: 217554 - 218306 (+)
Type: CAZyme
Location: 217554 - 218306 (+)
Gene ID: Rep_342_c_1_207
Type: CAZyme
Location: 218322 - 219539 (+)
Type: CAZyme
Location: 218322 - 219539 (+)
Gene ID: Rep_342_c_1_208
Type: STP
Location: 219566 - 220204 (+)
Type: STP
Location: 219566 - 220204 (+)
Gene ID: Rep_342_c_1_209
Type: CAZyme
Location: 220201 - 221322 (+)
Type: CAZyme
Location: 220201 - 221322 (+)
Gene ID: Rep_342_c_1_210
Type: pfam
Location: 221319 - 222605 (+)
Type: pfam
Location: 221319 - 222605 (+)
Gene ID: Rep_342_c_1_211
Type: CAZyme
Location: 222605 - 223531 (+)
Type: CAZyme
Location: 222605 - 223531 (+)
Gene ID: Rep_342_c_1_212
Type: pfam
Location: 223531 - 224034 (+)
Type: pfam
Location: 223531 - 224034 (+)
Gene ID: Rep_342_c_1_213
Type: CAZyme
Location: 224043 - 225206 (+)
Type: CAZyme
Location: 224043 - 225206 (+)
Gene ID: Rep_342_c_1_214
Type: pfam
Location: 225304 - 226419 (+)
Type: pfam
Location: 225304 - 226419 (+)
Gene ID: Rep_342_c_1_215
Type: pfam
Location: 226480 - 227532 (+)
Type: pfam
Location: 226480 - 227532 (+)
Gene ID: Rep_342_c_1_216
Type: CAZyme
Location: 227590 - 228333 (+)
Type: CAZyme
Location: 227590 - 228333 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Species
Paramuribaculum sp900760855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.