PROTEIN: Rep_342_c_1_204
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Protein File & Metadata
Source:
Rep_342_c_1_204.pdb
Genome ID:
Protein ID:
Rep_342_c_1_204
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Protein Sequence
MKITIVLRAP FLDRIPSLKN LIIYLANQGI RIKIISTSDS NYPPSKFSNL NIKLIKTSVR 60 TKKFQKPTVV GLAHNVICDF LFDKSDLYIG ADSFACKLLY QMRKVFSFKF WDFLLEYPEL 120 DDLQDRKILN TVSKIITHDK WHSDFLNANF GTSESQFLYL PNSTFTEETH FNSKFLHERL 180 SIDPTQHIIL HSGGLGKWFL CKELSENSSH LGKNSLIVFH TSHNTTGTTY FSELKDMVEI 240 RKLPVKFSLN PVSDKKLDEL VASASIGVAF YSIKDLGYKA EYMGVAAGKI GNYLKCGVPV 300 ICTRLPSLKY IEDYKCGVLI DDFSQLSDAV STILDRHDEY RDNAYKCYRE LWAPLPYLEK 360 ILSCINSL 368
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q7AQE2-F1-model_v4 | 1 | 368 | 1 | 381 | 0.83 |
0.8654 |
| AF-Q5FAD9-F1-model_v4 | 1 | 368 | 1 | 354 | 0.8268 |
0.8618 |
| AF-Q5F734-F1-model_v4 | 1 | 365 | 4 | 354 | 0.8181 |
0.8603 |
| AF-Q2G255-F1-model_v4 | 1 | 368 | 1 | 371 | 0.8138 |
0.8459 |
| AF-X8F781-F1-model_v4 | 1 | 368 | 2 | 381 | 0.8091 |
0.847 |
| AF-K0EXF1-F1-model_v4 | 1 | 368 | 2 | 375 | 0.8066 |
0.8347 |
| AF-O05083-F1-model_v4 | 1 | 365 | 2 | 353 | 0.8027 |
0.8401 |
| AF-Q58577-F1-model_v4 | 1 | 368 | 4 | 350 | 0.7988 |
0.8442 |
| AF-P26470-F1-model_v4 | 1 | 368 | 3 | 380 | 0.795 |
0.8285 |
| AF-Q0P9C7-F1-model_v4 | 1 | 367 | 2 | 365 | 0.7939 |
0.8186 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3S9MZL0-F1-model_v4 | GT0 | 1 | 368 | 4 | 364 | 0.8638 |
0.893 |
| AF-A0A1Z4PX46-F1-model_v4 | GT4 | 1 | 368 | 14 | 404 | 0.8599 |
0.9136 |
| AF-A0A518J1W6-F1-model_v4 | GT4 | 1 | 368 | 10 | 404 | 0.8442 |
0.9035 |
| UZQ55229.1 | GT4 | 1 | 368 | 7 | 411 | 0.8393 |
0.9003 |
| AF-A0A7S9RUI9-F1-model_v4 | GT4 | 1 | 368 | 1 | 357 | 0.8385 |
0.8693 |
| A0A0G1RUB4 | GT4 | 1 | 368 | 1 | 365 | 0.8368 |
0.8641 |
| AF-A0A127CI49-F1-model_v4 | GT4 | 1 | 368 | 1 | 361 | 0.8333 |
0.8615 |
| AF-A0A7S9R792-F1-model_v4 | GT4 | 1 | 368 | 1 | 357 | 0.8304 |
0.8626 |
| AF-A7ZEV7-F1-model_v4 | GT4 | 1 | 368 | 1 | 357 | 0.8301 |
0.8618 |
| AF-A0A518LN45-F1-model_v4 | GT4 | 1 | 368 | 2 | 361 | 0.8299 |
0.8617 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Z4PX46 | GT4 | 1 | 368 | 14 | 404 | 0.8599 |
0.9136 |
| A0A518J1W6 | GT4 | 1 | 368 | 10 | 404 | 0.8442 |
0.9035 |
| UZQ55229.1 | GT4 | 1 | 368 | 7 | 411 | 0.8393 |
0.9003 |
| A0A9E6Y2R6 | GT4 | 5 | 368 | 1 | 378 | 0.8369 |
0.8743 |
| A0A0G1RUB4 | GT4 | 1 | 368 | 1 | 365 | 0.8368 |
0.8641 |
| A0A517N8R7 | GT4 | 1 | 368 | 1 | 378 | 0.8341 |
0.8643 |
| A0A127CI49 | GT4 | 1 | 368 | 1 | 361 | 0.8333 |
0.8615 |
| M0MH67 | GT4 | 1 | 368 | 1 | 410 | 0.833 |
0.8939 |
| A0A2P1VRR9 | GT4 | 1 | 368 | 2 | 365 | 0.8315 |
0.8567 |
| T2GHR4 | GT4 | 1 | 368 | 2 | 372 | 0.8313 |
0.8531 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4xsp-assembly1.cif.gz_A | 1 | 368 | 2 | 365 | 0.8214 |
0.8462 |
| 3mbo-assembly1.cif.gz_B | 1 | 368 | 2 | 366 | 0.8192 |
0.8451 |
| 3mbo-assembly3.cif.gz_F | 1 | 368 | 2 | 366 | 0.8184 |
0.8444 |
| 6n1x-assembly1.cif.gz_A | 1 | 368 | 5 | 375 | 0.8163 |
0.846 |
| 3mbo-assembly4.cif.gz_G | 1 | 368 | 2 | 362 | 0.8155 |
0.8455 |
| 4xsu-assembly1.cif.gz_B | 1 | 368 | 2 | 367 | 0.8153 |
0.839 |
| 4xsr-assembly1.cif.gz_B | 1 | 368 | 2 | 364 | 0.8123 |
0.8401 |
| 4xsu-assembly1.cif.gz_A | 1 | 368 | 2 | 368 | 0.8115 |
0.8344 |
| 3mbo-assembly4.cif.gz_H | 1 | 368 | 2 | 366 | 0.8109 |
0.8388 |
| 3mbo-assembly3.cif.gz_E | 1 | 368 | 2 | 372 | 0.8109 |
0.8391 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42982-F1-model_v4 | 1 | 368 | 4 | 375 | 0.8133 |
0.8431 |
| AF-Q81ST7-F1-model_v4 | 1 | 368 | 3 | 373 | 0.8107 |
0.8442 |
| AF-P9WMZ2-F1-model_v4 | 1 | 368 | 2 | 381 | 0.8083 |
0.8462 |
| AF-Q46634-F1-model_v4 | 1 | 366 | 2 | 351 | 0.8028 |
0.8424 |
| AF-O05083-F1-model_v4 | 1 | 365 | 2 | 353 | 0.8027 |
0.8401 |
| AF-Q58577-F1-model_v4 | 1 | 368 | 4 | 350 | 0.7988 |
0.8442 |
| AF-P26470-F1-model_v4 | 1 | 368 | 3 | 380 | 0.795 |
0.8285 |
| AF-Q0P9C7-F1-model_v4 | 1 | 367 | 2 | 365 | 0.7939 |
0.8186 |
| AF-Q48453-F1-model_v4 | 1 | 368 | 1 | 358 | 0.7933 |
0.8219 |
| AF-O13933-F1-model_v4 | 1 | 368 | 25 | 423 | 0.7882 |
0.8581 |