Cluster: Rep_3394_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3394
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3394_c_28 | Rep_3394_c_28_12 | 10568 | 11401 | - | 3.A.1.1.25 |
| TC | Rep_3394_c_28 | Rep_3394_c_28_13 | 11415 | 12314 | - | 3.A.1.1.37 |
| STP | Rep_3394_c_28 | Rep_3394_c_28_14 | 12429 | 13721 | - | SBP_bac_1 |
| NULL(UNKNOWN) | Rep_3394_c_28 | Rep_3394_c_28_15 | 13892 | 14911 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3394_c_28 | Rep_3394_c_28_16 | 14950 | 16230 | - | GH4 |
Gene ID: Rep_3394_c_28_12
Type: TC
Location: 10568 - 11401 (-)
Type: TC
Location: 10568 - 11401 (-)
Gene ID: Rep_3394_c_28_13
Type: TC
Location: 11415 - 12314 (-)
Type: TC
Location: 11415 - 12314 (-)
Gene ID: Rep_3394_c_28_14
Type: STP
Location: 12429 - 13721 (-)
Type: STP
Location: 12429 - 13721 (-)
Gene ID: Rep_3394_c_28_15
Type:
Location: 13892 - 14911 (-)
Type:
Location: 13892 - 14911 (-)
Gene ID: Rep_3394_c_28_16
Type: CAZyme
Location: 14950 - 16230 (-)
Type: CAZyme
Location: 14950 - 16230 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CABSLJ01
Species
CABSLJ01 sp902478455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.