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PROTEIN: Rep_3394_c_28_15

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Protein File & Metadata
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Source:
Rep_3394_c_28_15.pdb
Genome ID:
Rep_3394
Protein ID:
Rep_3394_c_28_15

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Protein Sequence 
MAVKFLEDVG   TKLTSASRSE   MVHAISAASG   RVIIGETVSF   KQSTIDGVTN   VELLKSWGCD 60
MATINHYNVD   FPMVPGMPST   EEGIEKFGSF   FNVDGSKGCR   PSTKILEDSF   QSAFWQLGFG 120
ATIGEAKRLC   GIPIGMTLEP   VSEDSEYPLA   RVANEENARR   GMEQGASYIT   LIRTPKMSES 180
EFAGRVSQVR   SGVGEKGLVK   AGKMPWGGSS   FLVNADEFVT   EAELKALAKA   GADVIILPSP 240
GTIPGLTIEL   VRRWVGVVHD   CGLLAETTIG   TSQEGADPDV   IRRFAIDSKM   TGADLFQIGD 300
SVYGGCCVPE   NVMAFARAIK   GQRHTLRRAA   LSPLRGELR 339
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A132P1I0-F1-model_v4 1 335 1 308 0.8236 0.8758
AF-C1H5Z4-F1-model_v4 15 331 5 287 0.6162 0.6964
AF-Q42529-F1-model_v4 10 321 44 312 0.5853 0.7152
AF-Q32LQ4-F1-model_v4 6 330 1 321 0.5625 0.6546
AF-A0A175WAT7-F1-model_v4 9 324 1 288 0.543 0.6091
AF-Q32EA9-F1-model_v4 8 324 1 284 0.5419 0.6092
AF-P77704-F1-model_v4 15 336 1 278 0.5414 0.6142
AF-A0A0H3GRG9-F1-model_v4 16 336 1 278 0.5411 0.6138
AF-A0A077ZPT8-F1-model_v4 8 324 1 284 0.54 0.6074
AF-U7PYI2-F1-model_v4 9 325 2 289 0.5368 0.6045
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-F8L3S1-F1-model_v4 GH18 26 323 2 272 0.6214 0.714
AF-A0A7L6B428-F1-model_v4 GH18 5 319 1 287 0.5826 0.651
AF-G8S094-F1-model_v4 CBM5 , GH18 11 324 120 424 0.5163 0.6451
AF-A0A5P9Q7W4-F1-model_v4 GH10 4 339 18 419 0.5139 0.5966
AF-A0A3S8RPW0-F1-model_v4 CBM12 , GH18 14 325 188 488 0.4882 0.6517
AF-D3EL61-F1-model_v4 CBM12 , GH18 17 325 184 485 0.4873 0.647
AF-A0A1B1N462-F1-model_v4 CBM12 , GH18 11 325 188 491 0.487 0.6462
AF-A0A3S9V433-F1-model_v4 CBM12 , GH18 11 324 276 580 0.461 0.647
AF-K7ZK65-F1-model_v4 CBM12 , GH18 18 325 282 583 0.4567 0.6469
AF-A0A410GFW0-F1-model_v4 GH13_3 2 324 359 906 0.3851 0.6041
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
F8L3S1 GH18 26 323 2 272 0.6214 0.714
A0A1W5LFL7 GH13 27 325 10 325 0.5624 0.6404
A0A895YN27 GH18 17 325 117 372 0.5292 0.7295
A0A5P9Q684 GH18 11 327 60 393 0.5239 0.6174
A0A7G9P0T5 GH10 4 339 45 419 0.5152 0.5986
A0A4Y6PNB2 GH5 3 325 46 465 0.4839 0.6404
QSF42173.1 GH13 7 325 28 383 0.478 0.6149
Q8AV90 GH13_34 1 324 18 432 0.4774 0.6113
K7ZK65 CBM12 , GH18 18 325 282 583 0.4567 0.6469
A0A0U4CUG0 GH13 2 324 24 474 0.4524 0.5967
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4to8-assembly1.cif.gz_B 10 336 1 278 0.618 0.6981
4to8-assembly1.cif.gz_A 10 336 1 279 0.6148 0.6943
3q94-assembly1.cif.gz_A 10 328 1 285 0.6104 0.6828
6ofu-assembly1.cif.gz_C 10 331 1 262 0.6063 0.7016
5ud0-assembly1.cif.gz_A 10 328 1 282 0.6031 0.6761
7ag1-assembly1.cif.gz_Z 15 324 1 288 0.5908 0.6678
4eiv-assembly1.cif.gz_A 28 327 10 255 0.5895 0.7123
3q94-assembly1.cif.gz_B 7 324 1 277 0.5421 0.6166
5vjf-assembly1.cif.gz_B 8 324 1 294 0.5366 0.5959
3c52-assembly1.cif.gz_A 8 324 1 296 0.5345 0.5915
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O30128-F1-model_v4 16 323 4 254 0.6333 0.7656
AF-Q65D09-F1-model_v4 10 339 1 291 0.6077 0.6757
AF-O68814-F1-model_v4 14 322 35 262 0.5748 0.7597
AF-Q1B7H6-F1-model_v4 14 322 38 265 0.5738 0.7629
AF-A3Q119-F1-model_v4 14 322 38 265 0.5735 0.7625
AF-Q32EA9-F1-model_v4 8 324 1 284 0.5419 0.6092
AF-Q3Z0B4-F1-model_v4 8 324 1 284 0.5418 0.6088
AF-P77704-F1-model_v4 15 336 1 278 0.5414 0.6142
AF-B1IYY4-F1-model_v4 8 324 1 284 0.5401 0.6075
AF-B2TY92-F1-model_v4 8 324 1 284 0.5401 0.6074
Download Full SwissProt Results