Cluster: Rep_3394_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3394
- CGC Family ID: CGCFAM_05042
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3394_c_179 | Rep_3394_c_179_1 | 202 | 879 | - | 1.C.113.1.3 |
| pfam | Rep_3394_c_179 | Rep_3394_c_179_2 | 889 | 1758 | - | DegV |
| CAZyme | Rep_3394_c_179 | Rep_3394_c_179_3 | 2000 | 2830 | - | GH43_27 |
| NULL(UNKNOWN) | Rep_3394_c_179 | Rep_3394_c_179_4 | 2823 | 3887 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3394_c_179 | Rep_3394_c_179_5 | 4059 | 4967 | - | GT2 |
Gene ID: Rep_3394_c_179_1
Type: TC
Location: 202 - 879 (-)
Type: TC
Location: 202 - 879 (-)
Gene ID: Rep_3394_c_179_2
Type: pfam
Location: 889 - 1758 (-)
Type: pfam
Location: 889 - 1758 (-)
Gene ID: Rep_3394_c_179_3
Type: CAZyme
Location: 2000 - 2830 (-)
Type: CAZyme
Location: 2000 - 2830 (-)
Gene ID: Rep_3394_c_179_4
Type:
Location: 2823 - 3887 (-)
Type:
Location: 2823 - 3887 (-)
Gene ID: Rep_3394_c_179_5
Type: CAZyme
Location: 4059 - 4967 (-)
Type: CAZyme
Location: 4059 - 4967 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CABSLJ01
Species
CABSLJ01 sp902478455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.