PROTEIN: Rep_3394_c_179_4
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Protein File & Metadata
Source:
Rep_3394_c_179_4.pdb
Genome ID:
Protein ID:
Rep_3394_c_179_4
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Protein Sequence
MEPIQLAVYT RKPVAGDYSA SLANSIHFAF SRDGHFQALN RNYGILFPSA GIDEKNTIVE 60 KGAVSPCIFR LPDGAFGILA VRVGKDGAAD AGSAGKLLFW RSQNLVQFSG EQLIDLGLSL 120 QPARAAVQND GGALTLVWQD TRGETYRNAV CPDGDGLTLS PPVKTEAAVW QAAPLAALEG 180 AIPGNAIVIC EEELQTLCDA WLPLHSVAVE LPPLIQAKSA QDLENVRARV LYSDGSFHEK 240 PVVWQTDGVD FQTPGLYEVR GMVRQKTYSF PLARGYADPV IFHWDGRFYF ISTNDNTGQV 300 GLYVREADTV DGLFAPGVEE HLILGYDEDR GYKSTFWAPE FHVISLFVGS VRCV 354
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A385TNT1-F1-model_v4 | GH43_27 | 1 | 354 | 2 | 384 | 0.6781 |
0.8611 |
| AF-A0A089KI22-F1-model_v4 | GH43_27 | 1 | 354 | 6 | 388 | 0.6739 |
0.8582 |
| AF-A0A1B2DLS9-F1-model_v4 | GH43_27 | 1 | 354 | 7 | 391 | 0.6735 |
0.8609 |
| AF-B7GGW1-F1-model_v4 | GH43_27 | 1 | 354 | 10 | 392 | 0.6735 |
0.8592 |
| AF-M1ML12-F1-model_v4 | GH43_27 | 1 | 354 | 7 | 389 | 0.6728 |
0.8564 |
| WAJ23194.1 | GH43_27 | 1 | 354 | 5 | 379 | 0.6727 |
0.8593 |
| AF-A0A1B2E7Q4-F1-model_v4 | GH43_27 | 1 | 354 | 2 | 384 | 0.6726 |
0.856 |
| AF-A0A7U4HGH3-F1-model_v4 | GH43_27 | 1 | 354 | 6 | 388 | 0.6722 |
0.8562 |
| AF-A0A1J0GGU9-F1-model_v4 | GH43_27 | 1 | 354 | 6 | 389 | 0.6722 |
0.856 |
| AF-A0A089MFF8-F1-model_v4 | GH43_27 | 1 | 354 | 6 | 388 | 0.6707 |
0.8544 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WAJ23194.1 | GH43_27 | 1 | 354 | 5 | 379 | 0.6727 |
0.8593 |
| A0A2M9N0A4 | GH43_27 | 1 | 354 | 39 | 420 | 0.6606 |
0.8578 |
| A0A6B8LIX0 | GH43_27 | 1 | 354 | 4 | 383 | 0.6587 |
0.839 |
| A0A173VWM7 | GH43_27 | 3 | 354 | 1 | 382 | 0.6567 |
0.8441 |
| A0A416HVH4 | GH43_27 | 3 | 354 | 1 | 382 | 0.6382 |
0.8226 |
| A0A0F4L1H0 | GH43_27 | 1 | 354 | 13 | 531 | 0.624 |
0.851 |
| WEV53084.1 | GH43_27 | 1 | 354 | 7 | 557 | 0.6157 |
0.848 |
| A0A078KQK7 | GH43_27 | 26 | 354 | 1 | 357 | 0.6083 |
0.818 |
| A0A416HW48 | GH43_27 | 1 | 354 | 7 | 355 | 0.6079 |
0.7711 |
| A0A5B8AUU5 | GH43_27 | 1 | 354 | 434 | 861 | 0.5519 |
0.8526 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.