Cluster: Rep_3394_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3394
- CGC Family ID: CGCFAM_00011
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3394_c_1 | Rep_3394_c_1_3 | 2882 | 4816 | - | 3.A.1.135.5 |
| TC | Rep_3394_c_1 | Rep_3394_c_1_4 | 4803 | 6551 | - | 3.A.1.135.5 |
| TF | Rep_3394_c_1 | Rep_3394_c_1_5 | 6637 | 7062 | - | MarR |
| CAZyme | Rep_3394_c_1 | Rep_3394_c_1_6 | 7603 | 8829 | + | GT4 |
| CAZyme | Rep_3394_c_1 | Rep_3394_c_1_7 | 8786 | 9610 | + | GT2 |
| NULL(UNKNOWN) | Rep_3394_c_1 | Rep_3394_c_1_8 | 9657 | 11051 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3394_c_1 | Rep_3394_c_1_9 | 11029 | 11802 | + | 3.A.1.103.4 |
| TC | Rep_3394_c_1 | Rep_3394_c_1_10 | 11822 | 12583 | + | 3.A.1.103.4 |
Gene ID: Rep_3394_c_1_3
Type: TC
Location: 2882 - 4816 (-)
Type: TC
Location: 2882 - 4816 (-)
Gene ID: Rep_3394_c_1_4
Type: TC
Location: 4803 - 6551 (-)
Type: TC
Location: 4803 - 6551 (-)
Gene ID: Rep_3394_c_1_5
Type: TF
Location: 6637 - 7062 (-)
Type: TF
Location: 6637 - 7062 (-)
Gene ID: Rep_3394_c_1_6
Type: CAZyme
Location: 7603 - 8829 (+)
Type: CAZyme
Location: 7603 - 8829 (+)
Gene ID: Rep_3394_c_1_7
Type: CAZyme
Location: 8786 - 9610 (+)
Type: CAZyme
Location: 8786 - 9610 (+)
Gene ID: Rep_3394_c_1_8
Type:
Location: 9657 - 11051 (+)
Type:
Location: 9657 - 11051 (+)
Gene ID: Rep_3394_c_1_9
Type: TC
Location: 11029 - 11802 (+)
Type: TC
Location: 11029 - 11802 (+)
Gene ID: Rep_3394_c_1_10
Type: TC
Location: 11822 - 12583 (+)
Type: TC
Location: 11822 - 12583 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CABSLJ01
Species
CABSLJ01 sp902478455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.