Cluster: Rep_3382_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3382
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3382_c_0 | Rep_3382_c_0_918 | 860351 | 861751 | + | 2.A.50.2.1 |
| pfam | Rep_3382_c_0 | Rep_3382_c_0_919 | 861748 | 862992 | + | DHHW | ALGX |
| pfam | Rep_3382_c_0 | Rep_3382_c_0_920 | 863185 | 864168 | + | GFO_IDH_MocA | GFO_IDH_MocA_C3 |
| CAZyme | Rep_3382_c_0 | Rep_3382_c_0_921 | 864693 | 865373 | + | GH25 |
Gene ID: Rep_3382_c_0_918
Type: TC
Location: 860351 - 861751 (+)
Type: TC
Location: 860351 - 861751 (+)
Gene ID: Rep_3382_c_0_919
Type: pfam
Location: 861748 - 862992 (+)
Type: pfam
Location: 861748 - 862992 (+)
Gene ID: Rep_3382_c_0_920
Type: pfam
Location: 863185 - 864168 (+)
Type: pfam
Location: 863185 - 864168 (+)
Gene ID: Rep_3382_c_0_921
Type: CAZyme
Location: 864693 - 865373 (+)
Type: CAZyme
Location: 864693 - 865373 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp000435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.