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Cluster: Rep_3382_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3382_c_0 Rep_3382_c_0_799 742145 742909 - GH13_9
CAZyme Rep_3382_c_0 Rep_3382_c_0_800 742909 743943 - CBM48 | GH13_9
TC Rep_3382_c_0 Rep_3382_c_0_801 744322 745263 + 3.D.2.1.1
pfam Rep_3382_c_0 Rep_3382_c_0_802 745324 746169 - Patatin | DUF6363
TC Rep_3382_c_0 Rep_3382_c_0_803 746543 748894 + 3.A.9.1.2
TC Rep_3382_c_0 Rep_3382_c_0_804 749157 749489 + 3.A.1.122.14
TC Rep_3382_c_0 Rep_3382_c_0_805 749533 750069 + 3.A.1.122.15
NULL(UNKNOWN) Rep_3382_c_0 Rep_3382_c_0_806 750072 751970 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3382_c_0 Rep_3382_c_0_807 751957 753375 + 3.A.1.122.2
Gene ID: Rep_3382_c_0_799
Type: CAZyme
Location: 742145 - 742909 (-)
Gene ID: Rep_3382_c_0_800
Type: CAZyme
Location: 742909 - 743943 (-)
Gene ID: Rep_3382_c_0_801
Type: TC
Location: 744322 - 745263 (+)
Gene ID: Rep_3382_c_0_802
Type: pfam
Location: 745324 - 746169 (-)
Gene ID: Rep_3382_c_0_803
Type: TC
Location: 746543 - 748894 (+)
Gene ID: Rep_3382_c_0_804
Type: TC
Location: 749157 - 749489 (+)
Gene ID: Rep_3382_c_0_805
Type: TC
Location: 749533 - 750069 (+)
Gene ID: Rep_3382_c_0_806
Type:
Location: 750072 - 751970 (+)
Gene ID: Rep_3382_c_0_807
Type: TC
Location: 751957 - 753375 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_3382_c_0_804 omnivore > vegetarian 2.33285 0.03386

🧭 Explore Read Mapping of CGC

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