Cluster: Rep_3382_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3382
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3382_c_0 | Rep_3382_c_0_273 | 250717 | 252072 | + | 2.A.66.1.25 |
| pfam | Rep_3382_c_0 | Rep_3382_c_0_274 | 252100 | 253020 | + | EamA | EamA |
| pfam | Rep_3382_c_0 | Rep_3382_c_0_275 | 253025 | 253504 | + | DNA_binding_1 | Methyltransf_1N |
| CAZyme | Rep_3382_c_0 | Rep_3382_c_0_276 | 253580 | 254716 | - | GT28 |
Gene ID: Rep_3382_c_0_273
Type: TC
Location: 250717 - 252072 (+)
Type: TC
Location: 250717 - 252072 (+)
Gene ID: Rep_3382_c_0_274
Type: pfam
Location: 252100 - 253020 (+)
Type: pfam
Location: 252100 - 253020 (+)
Gene ID: Rep_3382_c_0_275
Type: pfam
Location: 253025 - 253504 (+)
Type: pfam
Location: 253025 - 253504 (+)
Gene ID: Rep_3382_c_0_276
Type: CAZyme
Location: 253580 - 254716 (-)
Type: CAZyme
Location: 253580 - 254716 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp000435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.