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Cluster: Rep_3363_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3363_c_13 Rep_3363_c_13_27 38750 40393 + 3.A.1.1.9
TC Rep_3363_c_13 Rep_3363_c_13_28 40413 41342 + 3.A.1.1.9
TC Rep_3363_c_13 Rep_3363_c_13_29 41355 42245 + 3.A.1.1.9
CAZyme Rep_3363_c_13 Rep_3363_c_13_30 42366 43862 + CBM66
NULL(UNKNOWN) Rep_3363_c_13 Rep_3363_c_13_31 44001 44900 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3363_c_13 Rep_3363_c_13_32 44913 47108 + GH51_1
CAZyme Rep_3363_c_13 Rep_3363_c_13_33 47182 48876 + GH51_1
CAZyme Rep_3363_c_13 Rep_3363_c_13_34 48890 50422 + GH43_26
Gene ID: Rep_3363_c_13_27
Type: TC
Location: 38750 - 40393 (+)
Gene ID: Rep_3363_c_13_28
Type: TC
Location: 40413 - 41342 (+)
Gene ID: Rep_3363_c_13_29
Type: TC
Location: 41355 - 42245 (+)
Gene ID: Rep_3363_c_13_30
Type: CAZyme
Location: 42366 - 43862 (+)
Gene ID: Rep_3363_c_13_31
Type:
Location: 44001 - 44900 (+)
Gene ID: Rep_3363_c_13_32
Type: CAZyme
Location: 44913 - 47108 (+)
Gene ID: Rep_3363_c_13_33
Type: CAZyme
Location: 47182 - 48876 (+)
Gene ID: Rep_3363_c_13_34
Type: CAZyme
Location: 48890 - 50422 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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