PROTEIN: Rep_3363_c_13_31
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Protein File & Metadata
Source:
Rep_3363_c_13_31.pdb
Genome ID:
Protein ID:
Rep_3363_c_13_31
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Protein Sequence
MNMKFLKKAG ALLIGAAVAV SCAAMTASAE ETVLFEDNFD GSKESSWTQF WGDWTFGGEE 60 GGLSVTTADS TQDWPKIITG VDEGWTDYVI EMDLENVAEG GVIFRSNNPV AGPDGFGGYY 120 IGYDSAYMFA GMDDNGTWKI LPDDGPEAPA AAALPYAVSM HWKIVVQGDT FTAYVDDMNT 180 PFVQVQDGTY AQGGVGVRFH VLAGDTSGSV KNLKIYQLDE TAGTVSSQEE SSKPESSQAT 240 SEPASSEPAS SQATASSQEA AGNADSGDSY MMWVWIGVGV VAAAGIIVAA VVISKKKRK 299
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C1H735-F1-model_v4 | 18 | 221 | 12 | 242 | 0.4483 |
0.745 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1H4SDX4 | CBM0 | 9 | 219 | 3 | 220 | 0.6295 |
0.7692 |
| WGP08706.1 | CBM66 | 33 | 295 | 1 | 216 | 0.608 |
0.7348 |
| AF-A0A6C0GS63-F1-model_v4 | CBM66 | 25 | 231 | 23 | 231 | 0.6071 |
0.7732 |
| A0A958WDG3 | CBM0 | 27 | 218 | 44 | 245 | 0.578 |
0.8118 |
| QYJ02657.1 | GH16 | 12 | 221 | 9 | 247 | 0.4988 |
0.7048 |
| AF-I0GXB6-F1-model_v4 | CBM66 , PL3_4 | 14 | 247 | 27 | 237 | 0.4366 |
0.763 |
| AF-A0A3T1AS23-F1-model_v4 | CBM66 , PL3_4 | 17 | 222 | 30 | 218 | 0.4288 |
0.8322 |
| AF-A0A4P7MZJ5-F1-model_v4 | CBM66 , GH43_34 | 27 | 218 | 310 | 503 | 0.424 |
0.8149 |
| AF-A0A810NGR6-F1-model_v4 | CBM66 , PL1 | 27 | 291 | 24 | 211 | 0.4114 |
0.8247 |
| AF-E4S464-F1-model_v4 | CBM66 , PL9_1 | 22 | 291 | 23 | 217 | 0.4091 |
0.8402 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WGP08706.1 | CBM66 | 33 | 295 | 1 | 216 | 0.608 |
0.7348 |
| A0A6C0GS63 | CBM66 | 25 | 231 | 23 | 231 | 0.6071 |
0.7732 |
| QYJ02657.1 | GH16 | 12 | 221 | 9 | 247 | 0.4988 |
0.7048 |
| A0A5B9PAN7 | CBM67 | 28 | 294 | 29 | 259 | 0.4652 |
0.7081 |
| I0GXB6 | CBM66 , PL3_4 | 14 | 247 | 27 | 237 | 0.4366 |
0.763 |
| A0A0C6F6F0 | GH16_5 | 26 | 270 | 7 | 501 | 0.4319 |
0.6633 |
| A0A1B2DE61 | CBM66 , PL1 | 23 | 267 | 23 | 318 | 0.395 |
0.6762 |
| A0A2Z5G1R7 | CBM66 | 32 | 265 | 39 | 250 | 0.3784 |
0.739 |
| UMG94681.1 | CBM6 , CBM91 | 33 | 233 | 470 | 685 | 0.3582 |
0.747 |
| A0A7G8UMA5 | CBM66 , CBM9 | 22 | 225 | 36 | 252 | 0.3557 |
0.7944 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4b1m-assembly3.cif.gz_C | 37 | 217 | 2 | 161 | 0.6465 |
0.8581 |
| 2e6v-assembly5.cif.gz_E | 30 | 221 | 1 | 215 | 0.5722 |
0.7781 |
| 2e6v-assembly2.cif.gz_B | 30 | 221 | 1 | 218 | 0.568 |
0.785 |
| 2duo-assembly2.cif.gz_B | 29 | 221 | 1 | 229 | 0.5644 |
0.7847 |
| 3o0x-assembly2.cif.gz_B | 30 | 220 | 1 | 222 | 0.5303 |
0.7529 |
| 3o0w-assembly1.cif.gz_A | 30 | 220 | 1 | 223 | 0.5283 |
0.7486 |
| 2e6v-assembly4.cif.gz_D | 29 | 223 | 1 | 218 | 0.528 |
0.7202 |
| 2e6v-assembly3.cif.gz_C | 30 | 222 | 1 | 217 | 0.5272 |
0.7237 |
| 4jqt-assembly1.cif.gz_B | 29 | 299 | 1 | 385 | 0.5083 |
0.6661 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.