Cluster: Rep_3303_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3303
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3303_c_60 | Rep_3303_c_60_4 | 2114 | 3550 | + | 2.A.3.8.12 |
| NULL(UNKNOWN) | Rep_3303_c_60 | Rep_3303_c_60_5 | 3595 | 5049 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3303_c_60 | Rep_3303_c_60_6 | 5039 | 5998 | + | GT2 |
Gene ID: Rep_3303_c_60_4
Type: TC
Location: 2114 - 3550 (+)
Type: TC
Location: 2114 - 3550 (+)
Gene ID: Rep_3303_c_60_5
Type:
Location: 3595 - 5049 (+)
Type:
Location: 3595 - 5049 (+)
Gene ID: Rep_3303_c_60_6
Type: CAZyme
Location: 5039 - 5998 (+)
Type: CAZyme
Location: 5039 - 5998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp002320035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.