PROTEIN: Rep_3303_c_60_5
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Protein File & Metadata
Source:
Rep_3303_c_60_5.pdb
Genome ID:
Protein ID:
Rep_3303_c_60_5
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Protein Sequence
MKAEKISRFF IGTMLALFAL LIVSAMLLGI FCGDGSRGRM ASFAAALALA AAYGLAMRWL 60 QAEKFRLRAL NAAKTGAVLA ALCLAFNLAW VLFFQLEPSV DFLTFWNTAR DLASGGELSQ 120 GIYVALFPHI LGYSAFLSIF IRLFGPLPML APTLNVLLTT ASGVIIYLLC LRWRGVRTAF 180 LAMLLWTLCP SKLLYNAMVL SEPLYTFLVL LFMLVLSGLE GRFGREKCGQ WQLGLLALGA 240 AGALALMNAA RPIAAVPIIA FFIWLLLLRG RALGDTRLWR RWLAFAGALL ALYFLIGRCW 300 SAWAEQTLGE KLPDIPGYSI CVGFNTRTGG SYADEDMNLL FECRKELGSA AAAQDRMLAY 360 ARDRVESGEI DFPALFANKL RVFLGNDEGG AYYSLAGLNP RQYTLLAMAS NVFYYFLLLL 420 ALGGALNIWR DRNKRALLLA PMYVLGLTLA QMLVEVAGRY HYSIIPMLVI CAAFSCGERR 480 KNAA 484
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EYW2-F1-model_v4 | 68 | 483 | 22 | 452 | 0.6382 |
0.7629 |
| AF-Q9CD61-F1-model_v4 | 68 | 484 | 17 | 452 | 0.6339 |
0.7612 |
| AF-P9WN05-F1-model_v4 | 68 | 483 | 39 | 472 | 0.6229 |
0.7574 |
| AF-Q8ZP99-F1-model_v4 | 67 | 480 | 12 | 357 | 0.5597 |
0.799 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A518BPR5-F1-model_v4 | GT83 | 69 | 482 | 7 | 434 | 0.6455 |
0.8539 |
| AF-A0A4P6GND2-F1-model_v4 | GT83 | 66 | 479 | 1 | 349 | 0.5815 |
0.8161 |
| AF-A0A1H0RAI7-F1-model_v4 | GT83 | 66 | 479 | 1 | 349 | 0.5812 |
0.8157 |
| A0A919H1R8 | GT83 | 70 | 479 | 1 | 325 | 0.5776 |
0.8531 |
| AF-K9NKU0-F1-model_v4 | GT83 | 66 | 479 | 1 | 349 | 0.5768 |
0.8193 |
| AF-A0A6I6VDK4-F1-model_v4 | GT83 | 66 | 479 | 1 | 349 | 0.5764 |
0.8186 |
| AF-A0A2Z4RF78-F1-model_v4 | GT83 | 66 | 479 | 1 | 349 | 0.5756 |
0.8172 |
| AF-A0A1H1ZXT8-F1-model_v4 | GT83 | 66 | 479 | 1 | 349 | 0.5752 |
0.8132 |
| AF-A0A1B3X237-F1-model_v4 | GT83 | 70 | 479 | 1 | 333 | 0.5752 |
0.8305 |
| AF-A0A1H2N1M9-F1-model_v4 | GT83 | 66 | 479 | 1 | 349 | 0.5746 |
0.8181 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UTA49138.1 | GT39 | 64 | 483 | 2 | 410 | 0.6557 |
0.7662 |
| A0A518BPR5 | GT83 | 69 | 482 | 7 | 434 | 0.6455 |
0.8539 |
| WCO68223.1 | GT39 | 71 | 482 | 1 | 389 | 0.6452 |
0.7673 |
| A0A5E3ZVR0 | GT39 | 8 | 484 | 45 | 495 | 0.6159 |
0.7133 |
| A0A3G8ZKL7 | GT39 | 68 | 483 | 67 | 492 | 0.6149 |
0.759 |
| A0A7D3VVG1 | GT39 | 68 | 484 | 20 | 483 | 0.6127 |
0.7493 |
| A0A3G6J888 | GT39 | 1 | 482 | 26 | 499 | 0.6095 |
0.6745 |
| A0A3Q9J410 | GT39 | 59 | 484 | 20 | 485 | 0.6079 |
0.7543 |
| UQN15679.1 | GT39 | 59 | 482 | 18 | 513 | 0.6076 |
0.7506 |
| Q1ISV9 | GT2 | 67 | 482 | 19 | 431 | 0.5965 |
0.8171 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WN05-F1-model_v4 | 68 | 483 | 39 | 472 | 0.6229 |
0.7574 |