Cluster: Rep_3176_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3176
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3176_c_42 | Rep_3176_c_42_18 | 14615 | 15757 | - | CE9 |
| NULL(UNKNOWN) | Rep_3176_c_42 | Rep_3176_c_42_19 | 15768 | 17150 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3176_c_42 | Rep_3176_c_42_20 | 17147 | 19108 | - | NTP_transferase | APH |
| TC | Rep_3176_c_42 | Rep_3176_c_42_21 | 19266 | 20132 | - | 3.A.1.1.41 |
| TC | Rep_3176_c_42 | Rep_3176_c_42_22 | 20134 | 21015 | - | 3.A.1.1.41 |
| STP | Rep_3176_c_42 | Rep_3176_c_42_23 | 21233 | 22462 | - | SBP_bac_1 |
| TC | Rep_3176_c_42 | Rep_3176_c_42_24 | 22900 | 24015 | + | 3.A.1.1.26 |
Gene ID: Rep_3176_c_42_18
Type: CAZyme
Location: 14615 - 15757 (-)
Type: CAZyme
Location: 14615 - 15757 (-)
Gene ID: Rep_3176_c_42_19
Type:
Location: 15768 - 17150 (-)
Type:
Location: 15768 - 17150 (-)
Gene ID: Rep_3176_c_42_20
Type: pfam
Location: 17147 - 19108 (-)
Type: pfam
Location: 17147 - 19108 (-)
Gene ID: Rep_3176_c_42_21
Type: TC
Location: 19266 - 20132 (-)
Type: TC
Location: 19266 - 20132 (-)
Gene ID: Rep_3176_c_42_22
Type: TC
Location: 20134 - 21015 (-)
Type: TC
Location: 20134 - 21015 (-)
Gene ID: Rep_3176_c_42_23
Type: STP
Location: 21233 - 22462 (-)
Type: STP
Location: 21233 - 22462 (-)
Gene ID: Rep_3176_c_42_24
Type: TC
Location: 22900 - 24015 (+)
Type: TC
Location: 22900 - 24015 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp018265835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.