dbCAN Logo

PROTEIN: Rep_3176_c_42_19

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
Rep_3176_c_42_19.pdb
Genome ID:
Rep_3176
Protein ID:
Rep_3176_c_42_19

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKLHGIEIPV   KNAPKLDPAF   IPILKFNRAF   LATAKKPVSI   AVERADGQMA   ACRTFVHGTP 60
EMAEADHYYV   NRLVKTILWM   KGGFKIYVAG   DEGTYRYLKR   AYSAGGEQDF   DFDYMANIFE 120
RPFEVVLVDQ   IPAAKDCPKK   MGGHLEGCRI   GFDAGGSDRK   VSAVIDGESV   YSEEVVWFPK 180
VTADPDYHYD   GIVAALKSAA   AHLPRVDAVG   VSSAGVYINN   RTMNASLFLK   VPKDLFDAKV 240
KDIYIRAITD   TFGDVPFEVV   NDGDVSALAG   TMSLGEPNVL   GIAMGTSEAV   GYVDGEGRIT 300
GWLNELAFVP   VDCHPDAMED   EWSHDIGCGV   KYFSQDSVIK   LAPRAGIELD   ESLPPAEKLK 360
VVQRLMAEDS   AAAADVYATI   GTYLGHTLAY   YYDLYHCKHV   LLLGRVMSGK   GGDIILAEAR 420
RVLADEYPEL   TGAIFPTLPD   EKFRRVGQSA   AAASLPALKK 460
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-I6Y8D3-F1-model_v4 147 459 1 302 0.7284 0.8888
AF-Q8DNV3-F1-model_v4 146 460 1 294 0.7009 0.8655
AF-Q8ZLQ8-F1-model_v4 147 460 1 290 0.6999 0.8712
AF-P45425-F1-model_v4 147 460 1 290 0.6987 0.8701
AF-Q8ZRE5-F1-model_v4 148 460 1 302 0.6971 0.8524
AF-P23917-F1-model_v4 148 460 1 302 0.6962 0.8513
AF-A0A0H3GKA4-F1-model_v4 148 460 1 303 0.6948 0.85
AF-K0F0J8-F1-model_v4 147 458 1 293 0.6941 0.871
AF-Q32BB7-F1-model_v4 145 460 10 302 0.6926 0.8712
AF-A0A133CQB1-F1-model_v4 146 460 2 320 0.6908 0.8375
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 145 460 78 375 0.596 0.8343
AF-A0A7L4W925-F1-model_v4 GH170 146 447 1 294 0.4995 0.8311
A0A497ZP30 GH1 146 460 295 618 0.4772 0.7839
AF-A0A346SND6-F1-model_v4 GH1 146 460 452 775 0.4396 0.7868
AF-M4W6Q6-F1-model_v4 GH1 146 460 452 775 0.4358 0.7788
AF-A0A5P9GJS8-F1-model_v4 GH1 146 460 452 778 0.4352 0.777
AF-A0A222W361-F1-model_v4 GT2 146 460 366 654 0.4335 0.7815
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 145 460 78 375 0.596 0.8343
A0A7L4W925 GH170 146 447 1 294 0.4995 0.8311
A0A497ZP30 GH1 146 460 295 618 0.4772 0.7839
A0A5P9GJS8 GH1 146 460 452 778 0.4352 0.777
A0A222W361 GT2 146 460 366 654 0.4335 0.7815
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2aa4-assembly1.cif.gz_B 147 459 1 289 0.7055 0.8777
3vov-assembly1.cif.gz_C 147 460 1 289 0.6995 0.87
3vov-assembly1.cif.gz_B 147 460 1 298 0.6954 0.8551
3vov-assembly1.cif.gz_D 147 460 1 296 0.6951 0.8572
2qm1-assembly1.cif.gz_B 145 460 4 324 0.6921 0.8433
3vgk-assembly2.cif.gz_B 147 459 1 312 0.6897 0.8325
6jdo-assembly1.cif.gz_A 147 460 1 293 0.6884 0.8521
5nck-assembly1.cif.gz_B 147 460 1 291 0.6809 0.8456
6q26-assembly2.cif.gz_C 147 454 1 286 0.68 0.8495
2ap1-assembly1.cif.gz_A 146 459 1 305 0.6756 0.8243
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q1C5U9-F1-model_v4 146 460 1 290 0.7045 0.8749
AF-A7FG96-F1-model_v4 146 460 1 290 0.7042 0.8745
AF-B1IQQ7-F1-model_v4 147 460 1 291 0.704 0.8734
AF-B7UJV5-F1-model_v4 147 460 1 291 0.7039 0.8733
AF-A1AGB6-F1-model_v4 147 460 1 291 0.7039 0.8733
AF-Q0TCP4-F1-model_v4 147 460 1 291 0.7038 0.8732
AF-B2U1W2-F1-model_v4 147 460 1 291 0.7038 0.8732
AF-A7ZSB5-F1-model_v4 147 460 1 291 0.7038 0.8732
AF-A8A532-F1-model_v4 147 460 1 291 0.7038 0.8731
AF-B7MBY4-F1-model_v4 147 460 1 291 0.7038 0.8732
Download Full SwissProt Results