Cluster: Rep_311_CGC42
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_311
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_311_c_92 | Rep_311_c_92_10 | 15735 | 18911 | - | 1.B.14.6.1 |
| STP | Rep_311_c_92 | Rep_311_c_92_11 | 19001 | 19516 | - | Sigma70_r2 | Sigma70_r4_2 |
| TF | Rep_311_c_92 | Rep_311_c_92_12 | 19744 | 22524 | - | HTH_AraC |
| CAZyme | Rep_311_c_92 | Rep_311_c_92_13 | 22930 | 24780 | - | GH128 |
| TC | Rep_311_c_92 | Rep_311_c_92_14 | 24869 | 26791 | - | 1.B.14.3.1 |
Gene ID: Rep_311_c_92_10
Type: TC
Location: 15735 - 18911 (-)
Type: TC
Location: 15735 - 18911 (-)
Gene ID: Rep_311_c_92_11
Type: STP
Location: 19001 - 19516 (-)
Type: STP
Location: 19001 - 19516 (-)
Gene ID: Rep_311_c_92_12
Type: TF
Location: 19744 - 22524 (-)
Type: TF
Location: 19744 - 22524 (-)
Gene ID: Rep_311_c_92_13
Type: CAZyme
Location: 22930 - 24780 (-)
Type: CAZyme
Location: 22930 - 24780 (-)
Gene ID: Rep_311_c_92_14
Type: TC
Location: 24869 - 26791 (-)
Type: TC
Location: 24869 - 26791 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.