dbCAN Logo

Cluster: Rep_311_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_311_c_6 Rep_311_c_6_68 88794 90248 - 2.A.2.3.4
CAZyme Rep_311_c_6 Rep_311_c_6_69 90315 91484 - GH130_1
CAZyme Rep_311_c_6 Rep_311_c_6_70 91559 92761 - GH26
NULL(UNKNOWN) Rep_311_c_6 Rep_311_c_6_71 92980 94596 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_311_c_6 Rep_311_c_6_72 94637 95527 - UbiA
TC Rep_311_c_6 Rep_311_c_6_73 95546 97390 - 3.A.1.106.1
TC Rep_311_c_6 Rep_311_c_6_74 97674 98930 - 2.A.1.2.97
STP Rep_311_c_6 Rep_311_c_6_75 99179 99685 - Sigma70_r2 | Sigma70_r4_2
TC Rep_311_c_6 Rep_311_c_6_76 99898 101178 - 9.A.40.2.2
Gene ID: Rep_311_c_6_68
Type: TC
Location: 88794 - 90248 (-)
Gene ID: Rep_311_c_6_69
Type: CAZyme
Location: 90315 - 91484 (-)
Gene ID: Rep_311_c_6_70
Type: CAZyme
Location: 91559 - 92761 (-)
Gene ID: Rep_311_c_6_71
Type:
Location: 92980 - 94596 (-)
Gene ID: Rep_311_c_6_72
Type: pfam
Location: 94637 - 95527 (-)
Gene ID: Rep_311_c_6_73
Type: TC
Location: 95546 - 97390 (-)
Gene ID: Rep_311_c_6_74
Type: TC
Location: 97674 - 98930 (-)
Gene ID: Rep_311_c_6_75
Type: STP
Location: 99179 - 99685 (-)
Gene ID: Rep_311_c_6_76
Type: TC
Location: 99898 - 101178 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List