Cluster: Rep_311_CGC39
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_311
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_311_c_85 | Rep_311_c_85_29 | 30627 | 32012 | + | 2.A.1.10.2 |
| pfam | Rep_311_c_85 | Rep_311_c_85_30 | 32019 | 32729 | + | Methyltrans_RNA | PUA_4 |
| pfam | Rep_311_c_85 | Rep_311_c_85_31 | 32742 | 33563 | + | DAHP_synth_1 |
| TC | Rep_311_c_85 | Rep_311_c_85_32 | 33564 | 35153 | - | 1.A.23.4.5 |
| pfam | Rep_311_c_85 | Rep_311_c_85_33 | 35638 | 36099 | + | NDK |
| CAZyme | Rep_311_c_85 | Rep_311_c_85_34 | 36132 | 37076 | + | CBM50 |
Gene ID: Rep_311_c_85_29
Type: TC
Location: 30627 - 32012 (+)
Type: TC
Location: 30627 - 32012 (+)
Gene ID: Rep_311_c_85_30
Type: pfam
Location: 32019 - 32729 (+)
Type: pfam
Location: 32019 - 32729 (+)
Gene ID: Rep_311_c_85_31
Type: pfam
Location: 32742 - 33563 (+)
Type: pfam
Location: 32742 - 33563 (+)
Gene ID: Rep_311_c_85_32
Type: TC
Location: 33564 - 35153 (-)
Type: TC
Location: 33564 - 35153 (-)
Gene ID: Rep_311_c_85_33
Type: pfam
Location: 35638 - 36099 (+)
Type: pfam
Location: 35638 - 36099 (+)
Gene ID: Rep_311_c_85_34
Type: CAZyme
Location: 36132 - 37076 (+)
Type: CAZyme
Location: 36132 - 37076 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.