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Cluster: Rep_311_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_311_c_79 Rep_311_c_79_44 49796 50998 - 2.A.23.2.7
STP Rep_311_c_79 Rep_311_c_79_45 51000 52211 - Aminotran_1_2
pfam Rep_311_c_79 Rep_311_c_79_46 52211 53497 - SUFBD_core | SufBD_N | SufBD_N
TC Rep_311_c_79 Rep_311_c_79_47 53534 54289 - 3.A.1.3.10
TC Rep_311_c_79 Rep_311_c_79_48 54404 56392 - 1.B.6.1.14
pfam Rep_311_c_79 Rep_311_c_79_49 56454 57062 - ADK | AAA_17 | AAA_33
STP Rep_311_c_79 Rep_311_c_79_50 57143 57688 - Pribosyltran
CAZyme Rep_311_c_79 Rep_311_c_79_51 57698 59014 - GT30
Gene ID: Rep_311_c_79_44
Type: TC
Location: 49796 - 50998 (-)
Gene ID: Rep_311_c_79_45
Type: STP
Location: 51000 - 52211 (-)
Gene ID: Rep_311_c_79_46
Type: pfam
Location: 52211 - 53497 (-)
Gene ID: Rep_311_c_79_47
Type: TC
Location: 53534 - 54289 (-)
Gene ID: Rep_311_c_79_48
Type: TC
Location: 54404 - 56392 (-)
Gene ID: Rep_311_c_79_49
Type: pfam
Location: 56454 - 57062 (-)
Gene ID: Rep_311_c_79_50
Type: STP
Location: 57143 - 57688 (-)
Gene ID: Rep_311_c_79_51
Type: CAZyme
Location: 57698 - 59014 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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