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Cluster: Rep_311_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_311_c_49 Rep_311_c_49_30 38568 39464 - 3.A.1.115.1
pfam Rep_311_c_49 Rep_311_c_49_31 39858 41609 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam Rep_311_c_49 Rep_311_c_49_32 41656 42252 + Flavin_Reduct
CAZyme Rep_311_c_49 Rep_311_c_49_33 42472 44952 + GT51
TC Rep_311_c_49 Rep_311_c_49_34 45031 47406 + 3.B.1.1.6
pfam Rep_311_c_49 Rep_311_c_49_35 47672 47926 + Ribosomal_L31
pfam Rep_311_c_49 Rep_311_c_49_36 48260 48814 + Pep_deformylase
TC Rep_311_c_49 Rep_311_c_49_37 48992 50677 + 3.A.1.120.6
TC Rep_311_c_49 Rep_311_c_49_38 50813 52504 + 2.A.81.1.2
Gene ID: Rep_311_c_49_30
Type: TC
Location: 38568 - 39464 (-)
Gene ID: Rep_311_c_49_31
Type: pfam
Location: 39858 - 41609 (+)
Gene ID: Rep_311_c_49_32
Type: pfam
Location: 41656 - 42252 (+)
Gene ID: Rep_311_c_49_33
Type: CAZyme
Location: 42472 - 44952 (+)
Gene ID: Rep_311_c_49_34
Type: TC
Location: 45031 - 47406 (+)
Gene ID: Rep_311_c_49_35
Type: pfam
Location: 47672 - 47926 (+)
Gene ID: Rep_311_c_49_36
Type: pfam
Location: 48260 - 48814 (+)
Gene ID: Rep_311_c_49_37
Type: TC
Location: 48992 - 50677 (+)
Gene ID: Rep_311_c_49_38
Type: TC
Location: 50813 - 52504 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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